Gene
RNA
| Item | Value |
|---|---|
| gene id | G269290 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 50894287 ~ 50894921 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU305957 | True | 635 | lncRNA | 0.36 | 1 | 50894287 | 50894921 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110520146 | ino80d | coding | upstream | 275526 | 50601983 ~ 50618761 (+) |
| LOC110520148 | LOC106586260 | coding | upstream | 292632 | 50595616 ~ 50601655 (+) |
| gpr1 | LOC106586257 | coding | upstream | 301982 | 50588958 ~ 50592305 (+) |
| osbpl6 | LOC106586252 | coding | upstream | 374422 | 50455039 ~ 50519865 (+) |
| agps | LOC106586249 | coding | upstream | 517197 | 50338167 ~ 50377090 (+) |
| LOC110520157 | LOC106586094 | coding | downstream | 63093 | 50958014 ~ 50959445 (+) |
| uggt2 | LOC106586268 | coding | downstream | 170253 | 51065174 ~ 51110275 (+) |
| LOC110520162 | LOC106586269 | coding | downstream | 253623 | 51148544 ~ 51199761 (+) |
| LOC110520163 | LOC106586270 | coding | downstream | 333564 | 51228485 ~ 51230831 (+) |
| LOC110520164 | LOC100137092 | coding | downstream | 363871 | 51258792 ~ 51262216 (+) |
| G269289 | NA | non-coding | upstream | 915 | 50893136 ~ 50893372 (+) |
| G269279 | NA | non-coding | upstream | 18788 | 50875289 ~ 50875499 (+) |
| G269231 | LOC106586263 | non-coding | upstream | 84534 | 50804590 ~ 50809753 (+) |
| G269224 | NA | non-coding | upstream | 104232 | 50788800 ~ 50790055 (+) |
| G269223 | NA | non-coding | upstream | 106029 | 50787571 ~ 50788258 (+) |
| G269334 | NA | non-coding | downstream | 64577 | 50959498 ~ 50959805 (+) |
| G269336 | LOC106586266 | non-coding | downstream | 65071 | 50959992 ~ 50964940 (+) |
| G269356 | NA | non-coding | downstream | 89700 | 50984621 ~ 50985007 (+) |
| G269365 | NA | non-coding | downstream | 99690 | 50994611 ~ 50995038 (+) |
| G269366 | NA | non-coding | downstream | 101166 | 50996087 ~ 50996330 (+) |
| hoxd3a | hoxd3 | other | upstream | 711261 | 50162278 ~ 50184327 (+) |
| G267529 | NA | other | upstream | 1038785 | 49836617 ~ 49855502 (+) |
| G267381 | NA | other | upstream | 1338449 | 49554498 ~ 49555838 (+) |
| G267358 | NA | other | upstream | 1381812 | 49510803 ~ 49512475 (+) |
| G269291 | rap2a | other | downstream | 3668 | 50898589 ~ 50900277 (+) |
| LOC110520169 | il1rl1 | other | downstream | 679059 | 51573980 ~ 51582567 (+) |
| acvr2aa | LOC106586327 | other | downstream | 2272031 | 53124656 ~ 53172428 (+) |
| LOC110520187 | LOC106586325 | other | downstream | 2326506 | 53174264 ~ 53235027 (+) |
| LOC110520190 | LOC106586322 | other | downstream | 2396409 | 53291284 ~ 53339392 (+) |
