Gene
RNA
| Item | Value |
|---|---|
| gene id | G269334 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 50959498 ~ 50959805 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU306001 | True | 308 | lncRNA | 0.37 | 1 | 50959498 | 50959805 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110520157 | LOC106586094 | coding | upstream | 53 | 50958014 ~ 50959445 (+) |
| LOC110520146 | ino80d | coding | upstream | 340737 | 50601983 ~ 50618761 (+) |
| LOC110520148 | LOC106586260 | coding | upstream | 357843 | 50595616 ~ 50601655 (+) |
| gpr1 | LOC106586257 | coding | upstream | 367193 | 50588958 ~ 50592305 (+) |
| osbpl6 | LOC106586252 | coding | upstream | 439633 | 50455039 ~ 50519865 (+) |
| uggt2 | LOC106586268 | coding | downstream | 105369 | 51065174 ~ 51110275 (+) |
| LOC110520162 | LOC106586269 | coding | downstream | 188739 | 51148544 ~ 51199761 (+) |
| LOC110520163 | LOC106586270 | coding | downstream | 268680 | 51228485 ~ 51230831 (+) |
| LOC110520164 | LOC100137092 | coding | downstream | 298987 | 51258792 ~ 51262216 (+) |
| LOC110520165 | LOC106586271 | coding | downstream | 307268 | 51267073 ~ 51276411 (+) |
| G269290 | NA | non-coding | upstream | 64577 | 50894287 ~ 50894921 (+) |
| G269289 | NA | non-coding | upstream | 66126 | 50893136 ~ 50893372 (+) |
| G269279 | NA | non-coding | upstream | 83999 | 50875289 ~ 50875499 (+) |
| G269231 | LOC106586263 | non-coding | upstream | 149745 | 50804590 ~ 50809753 (+) |
| G269224 | NA | non-coding | upstream | 169443 | 50788800 ~ 50790055 (+) |
| G269336 | LOC106586266 | non-coding | downstream | 187 | 50959992 ~ 50964940 (+) |
| G269356 | NA | non-coding | downstream | 24816 | 50984621 ~ 50985007 (+) |
| G269365 | NA | non-coding | downstream | 34806 | 50994611 ~ 50995038 (+) |
| G269366 | NA | non-coding | downstream | 36282 | 50996087 ~ 50996330 (+) |
| G269374 | NA | non-coding | downstream | 46437 | 51006242 ~ 51006553 (+) |
| G269291 | rap2a | other | upstream | 59221 | 50898589 ~ 50900277 (+) |
| hoxd3a | hoxd3 | other | upstream | 776472 | 50162278 ~ 50184327 (+) |
| G267529 | NA | other | upstream | 1103996 | 49836617 ~ 49855502 (+) |
| G267381 | NA | other | upstream | 1403660 | 49554498 ~ 49555838 (+) |
| LOC110520169 | il1rl1 | other | downstream | 614175 | 51573980 ~ 51582567 (+) |
| acvr2aa | LOC106586327 | other | downstream | 2207147 | 53124656 ~ 53172428 (+) |
| LOC110520187 | LOC106586325 | other | downstream | 2261622 | 53174264 ~ 53235027 (+) |
| LOC110520190 | LOC106586322 | other | downstream | 2331525 | 53291284 ~ 53339392 (+) |
| G272965 | NA | other | downstream | 2689020 | 53648825 ~ 53652431 (+) |
