Gene
RNA
| Item | Value |
|---|---|
| gene id | G269385 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 51019344 ~ 51019559 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU306055 | True | 216 | lncRNA | 0.38 | 1 | 51019344 | 51019559 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110520157 | LOC106586094 | coding | upstream | 59899 | 50958014 ~ 50959445 (+) |
| LOC110520146 | ino80d | coding | upstream | 400583 | 50601983 ~ 50618761 (+) |
| LOC110520148 | LOC106586260 | coding | upstream | 417689 | 50595616 ~ 50601655 (+) |
| gpr1 | LOC106586257 | coding | upstream | 427039 | 50588958 ~ 50592305 (+) |
| osbpl6 | LOC106586252 | coding | upstream | 499479 | 50455039 ~ 50519865 (+) |
| uggt2 | LOC106586268 | coding | downstream | 45615 | 51065174 ~ 51110275 (+) |
| LOC110520162 | LOC106586269 | coding | downstream | 128985 | 51148544 ~ 51199761 (+) |
| LOC110520163 | LOC106586270 | coding | downstream | 208926 | 51228485 ~ 51230831 (+) |
| LOC110520164 | LOC100137092 | coding | downstream | 239233 | 51258792 ~ 51262216 (+) |
| LOC110520165 | LOC106586271 | coding | downstream | 247514 | 51267073 ~ 51276411 (+) |
| G269378 | NA | non-coding | upstream | 8326 | 51010755 ~ 51011018 (+) |
| G269374 | NA | non-coding | upstream | 12791 | 51006242 ~ 51006553 (+) |
| G269366 | NA | non-coding | upstream | 23014 | 50996087 ~ 50996330 (+) |
| G269365 | NA | non-coding | upstream | 24306 | 50994611 ~ 50995038 (+) |
| G269356 | NA | non-coding | upstream | 34337 | 50984621 ~ 50985007 (+) |
| G269436 | NA | non-coding | downstream | 79252 | 51098811 ~ 51123995 (+) |
| G269409 | dnajc3 | non-coding | downstream | 101007 | 51120566 ~ 51121712 (+) |
| G269444 | NA | non-coding | downstream | 116689 | 51136248 ~ 51136495 (+) |
| G270279 | NA | non-coding | downstream | 395923 | 51415482 ~ 51415683 (+) |
| G270288 | NA | non-coding | downstream | 401615 | 51421174 ~ 51421663 (+) |
| G269291 | rap2a | other | upstream | 119067 | 50898589 ~ 50900277 (+) |
| hoxd3a | hoxd3 | other | upstream | 836318 | 50162278 ~ 50184327 (+) |
| G267529 | NA | other | upstream | 1163842 | 49836617 ~ 49855502 (+) |
| G267381 | NA | other | upstream | 1463506 | 49554498 ~ 49555838 (+) |
| LOC110520169 | il1rl1 | other | downstream | 554421 | 51573980 ~ 51582567 (+) |
| acvr2aa | LOC106586327 | other | downstream | 2147393 | 53124656 ~ 53172428 (+) |
| LOC110520187 | LOC106586325 | other | downstream | 2201868 | 53174264 ~ 53235027 (+) |
| LOC110520190 | LOC106586322 | other | downstream | 2271771 | 53291284 ~ 53339392 (+) |
| G272965 | NA | other | downstream | 2629266 | 53648825 ~ 53652431 (+) |
