Gene
RNA
| Item | Value |
|---|---|
| gene id | G269981 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 51023084 ~ 51023294 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: apoptosis-inducing factor 3-like isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU306713 | True | 211 | lncRNA | 0.38 | 1 | 51023084 | 51023294 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110520155 | LOC106586265 | coding | downstream | 72056 | 50912625 ~ 50951028 (-) |
| LOC110520154 | rap2a | coding | downstream | 111383 | 50898557 ~ 50911701 (-) |
| farp1 | LOC106586263 | coding | downstream | 126802 | 50788788 ~ 50896282 (-) |
| LOC110520150 | LOC106586262 | coding | downstream | 234863 | 50665795 ~ 50788221 (-) |
| slc15a1a | LOC106586093 | coding | downstream | 357477 | 50652633 ~ 50665607 (-) |
| dnajc3a | dnajc3 | coding | upstream | 88551 | 51111845 ~ 51126305 (-) |
| LOC110520160 | LOC106586095 | coding | upstream | 103306 | 51126600 ~ 51130404 (-) |
| cldn10b | LOC106586096 | coding | upstream | 107339 | 51130633 ~ 51135461 (-) |
| LOC110520166 | LOC106586272 | coding | upstream | 253627 | 51276921 ~ 51389582 (-) |
| LOC110504232 | LOC106586097 | coding | upstream | 440917 | 51464211 ~ 51470676 (-) |
| G269980 | NA | non-coding | downstream | 146 | 51022734 ~ 51022938 (-) |
| G269962 | NA | non-coding | downstream | 38663 | 50984213 ~ 50984421 (-) |
| G269954 | NA | non-coding | downstream | 53539 | 50969122 ~ 50969545 (-) |
| LOC110504222 | LOC106586266 | non-coding | downstream | 60366 | 50960859 ~ 51059220 (-) |
| G269947 | LOC106586094 | non-coding | downstream | 64408 | 50958270 ~ 50958676 (-) |
| G270057 | NA | non-coding | upstream | 113632 | 51136926 ~ 51137490 (-) |
| G270067 | NA | non-coding | upstream | 123723 | 51147017 ~ 51147288 (-) |
| G270091 | NA | non-coding | upstream | 146915 | 51170209 ~ 51171519 (-) |
| G270098 | NA | non-coding | upstream | 157795 | 51181089 ~ 51181542 (-) |
| G270105 | dct | non-coding | upstream | 172038 | 51195332 ~ 51267591 (-) |
| LOC110520139 | LOC106586251 | other | downstream | 580212 | 50440201 ~ 50442930 (-) |
| LOC110520121 | LOC106581751 | other | downstream | 1121546 | 49895327 ~ 49901575 (-) |
| LOC110520119 | NA | other | downstream | 1151439 | 49867187 ~ 49871681 (-) |
| LOC110520112 | LOC106586230 | other | downstream | 1455610 | 49563841 ~ 49608114 (-) |
| LOC118944672 | NA | other | downstream | 1520113 | 49494001 ~ 49503025 (-) |
| fgf9 | NA | other | upstream | 450030 | 51471899 ~ 51478510 (-) |
| il1rl1 | il1rl1 | other | upstream | 574105 | 51596933 ~ 51619476 (-) |
| LOC110520182 | NA | other | upstream | 1684889 | 52693956 ~ 52708816 (-) |
| G272713 | LOC106586324 | other | upstream | 2226632 | 53249926 ~ 53251084 (-) |
