G270289



Basic Information


Item Value
gene id G270289
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 51422033 ~ 51422325 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU307077
GCTTGAAGCAtgcaggtattacagactcggtcagggagaggttgaaaatgtcagtgaagacacttgccagttgttccgcgcatgctttgagtacacgtcctggtaatccatctgtccCCGCGgcttttgtgaatgttgacctgtttaaagatcttgcTCACATCGCCTACCTTGAGCGGTATCaaacagtcgtccagaacagccggtgctctcatgcatgcttcagtgttgcttgcctcaaagcagagcataaaaaggcatttagctcgtctggtaggctcgcgttaCAGGGA

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU307077 True 293 lncRNA 0.50 1 51422033 51422325

Neighbor


gene id symbol gene type direction distance location
LOC110520165 LOC106586271 coding upstream 145622 51267073 ~ 51276411 (+)
LOC110520164 LOC100137092 coding upstream 159817 51258792 ~ 51262216 (+)
LOC110520163 LOC106586270 coding upstream 191202 51228485 ~ 51230831 (+)
LOC110520162 LOC106586269 coding upstream 222272 51148544 ~ 51199761 (+)
uggt2 LOC106586268 coding upstream 311758 51065174 ~ 51110275 (+)
pdxka LOC106586273 coding downstream 68027 51490352 ~ 51500089 (+)
LOC110520168 LOC106586274 coding downstream 82196 51504521 ~ 51532634 (+)
LOC110520169 il1rl1 coding downstream 151680 51573980 ~ 51582567 (+)
LOC110520171 LOC106586099 coding downstream 199029 51621354 ~ 51624586 (+)
LOC110520174 LOC106586278 coding downstream 336931 51759256 ~ 51766986 (+)
G270288 NA non-coding upstream 370 51421174 ~ 51421663 (+)
G270279 NA non-coding upstream 6350 51415482 ~ 51415683 (+)
G269444 NA non-coding upstream 285538 51136248 ~ 51136495 (+)
G269436 NA non-coding upstream 298038 51098811 ~ 51123995 (+)
G269409 dnajc3 non-coding upstream 300321 51120566 ~ 51121712 (+)
G270335 NA non-coding downstream 49278 51471603 ~ 51472132 (+)
G270336 NA non-coding downstream 50261 51472586 ~ 51472945 (+)
G270337 NA non-coding downstream 50629 51472954 ~ 51473159 (+)
G270298 NA non-coding downstream 112062 51534387 ~ 51536375 (+)
G270363 NA non-coding downstream 115322 51537647 ~ 51538128 (+)
G269291 rap2a other upstream 521756 50898589 ~ 50900277 (+)
LOC110520146 ino80d other upstream 817217 50601983 ~ 50618761 (+)
hoxd3a hoxd3 other upstream 1239007 50162278 ~ 50184327 (+)
G267529 NA other upstream 1566531 49836617 ~ 49855502 (+)
G267381 NA other upstream 1866195 49554498 ~ 49555838 (+)
acvr2aa LOC106586327 other downstream 1744627 53124656 ~ 53172428 (+)
LOC110520187 LOC106586325 other downstream 1799102 53174264 ~ 53235027 (+)
LOC110520190 LOC106586322 other downstream 1869005 53291284 ~ 53339392 (+)
G272965 NA other downstream 2226500 53648825 ~ 53652431 (+)

Expression



Co-expression Network