Gene
RNA
| Item | Value |
|---|---|
| gene id | G270369 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 51549729 ~ 51549937 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU307164 | True | 209 | lncRNA | 0.38 | 1 | 51549729 | 51549937 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110520168 | LOC106586274 | coding | upstream | 17095 | 51504521 ~ 51532634 (+) |
| pdxka | LOC106586273 | coding | upstream | 49640 | 51490352 ~ 51500089 (+) |
| LOC110520165 | LOC106586271 | coding | upstream | 273318 | 51267073 ~ 51276411 (+) |
| LOC110520164 | LOC100137092 | coding | upstream | 287513 | 51258792 ~ 51262216 (+) |
| LOC110520163 | LOC106586270 | coding | upstream | 318898 | 51228485 ~ 51230831 (+) |
| LOC110520169 | il1rl1 | coding | downstream | 24068 | 51573980 ~ 51582567 (+) |
| LOC110520171 | LOC106586099 | coding | downstream | 71417 | 51621354 ~ 51624586 (+) |
| LOC110520174 | LOC106586278 | coding | downstream | 209319 | 51759256 ~ 51766986 (+) |
| LOC110520177 | LOC106586282 | coding | downstream | 830994 | 52380931 ~ 52442609 (+) |
| LOC110520178 | LOC106582420 | coding | downstream | 958838 | 52508775 ~ 52567291 (+) |
| G270363 | NA | non-coding | upstream | 11601 | 51537647 ~ 51538128 (+) |
| G270298 | NA | non-coding | upstream | 13354 | 51534387 ~ 51536375 (+) |
| G270337 | NA | non-coding | upstream | 76570 | 51472954 ~ 51473159 (+) |
| G270336 | NA | non-coding | upstream | 76784 | 51472586 ~ 51472945 (+) |
| G270335 | NA | non-coding | upstream | 77597 | 51471603 ~ 51472132 (+) |
| G270371 | il1rl1 | non-coding | downstream | 814 | 51550751 ~ 51606548 (+) |
| G270374 | il1rl1 | non-coding | downstream | 2175 | 51552112 ~ 51608618 (+) |
| G270451 | NA | non-coding | downstream | 133241 | 51683178 ~ 51683426 (+) |
| G270497 | NA | non-coding | downstream | 202749 | 51752686 ~ 51752919 (+) |
| G269291 | rap2a | other | upstream | 649452 | 50898589 ~ 50900277 (+) |
| LOC110520146 | ino80d | other | upstream | 944913 | 50601983 ~ 50618761 (+) |
| hoxd3a | hoxd3 | other | upstream | 1366703 | 50162278 ~ 50184327 (+) |
| G267529 | NA | other | upstream | 1694227 | 49836617 ~ 49855502 (+) |
| G267381 | NA | other | upstream | 1993891 | 49554498 ~ 49555838 (+) |
| acvr2aa | LOC106586327 | other | downstream | 1617015 | 53124656 ~ 53172428 (+) |
| LOC110520187 | LOC106586325 | other | downstream | 1671490 | 53174264 ~ 53235027 (+) |
| LOC110520190 | LOC106586322 | other | downstream | 1741393 | 53291284 ~ 53339392 (+) |
| G272965 | NA | other | downstream | 2098888 | 53648825 ~ 53652431 (+) |
