G270730 (LOC106586278)


Basic Information

Item Value
gene id G270730
gene name LOC106586278
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 51759144 ~ 51760413 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU307574
GGTTAGCAGGTGCTCCATGGCATCTGACCACTGAAGGAGCCTCATGAGGTACATCCATGCTTGTAGCCGGTAGGAGTTCCCGTCAGCAGCCTTGGGGTCTGCATAGAACTTCTCCAAGCTGCAGTTACCGTTGAAGGCGATAGGCAGAGGCTCCTTCTCCGCTGTCATCTTGTCCAAGTAGTGCGTGTTGGGCTCAGGCATGTACAGCATCCCCAGCTTATCAGCCAGACTCTTGGCCAGCGCCCCCTTTCCCGAGGCCAGGTTGCCATCAATGGAGATGATCTTGCTGTTCTCTTTGAACCTTGGGGTTGTCCTCTCGCCCAGTGCATATGCCCACCAGCCGTACCGTAGGTTCCTTAATGAGCTTGTGTGAATACCAGCCGTCTGAATAAGTGTCCCTGCTTTGAAAACGGCTGTCCCCGAGGGGATGACCAAACGAATCACCCGTAACGCCATGATTTTACCACCAGACCCGCAAATCTGACCCAAAAATCACCCTCTATGCAAGTTATGTCGAGGCGCGATAATAACGCGTGAAATTGTCTTTTTTGCCCGTAGTCGAGTAATATTGACGTCATCAAGTGTGTCCAATTGTATTGCCTGaaagaaaaatacaatttaaaatgaGCGCCATGGTTATCGTTATGGTAAGGGGTaaagttagggtttagg

Function

NR:

description
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 10, mitochondrial-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU307574 True 672 lncRNA 0.50 3 51759144 51760413

Neighbor

gene id symbol gene type direction distance location
LOC100135875 LOC100135875 coding downstream 24845 51688835 ~ 51734299 (-)
LOC110520172 LOC106586277 coding downstream 78232 51630789 ~ 51680912 (-)
il1rl1 il1rl1 coding downstream 139668 51596933 ~ 51619476 (-)
LOC110520170 il1rl1 coding downstream 199805 51550697 ~ 51559339 (-)
fgf9 NA coding downstream 280634 51471899 ~ 51478510 (-)
LOC110520176 LOC106586280 coding upstream 57151 51817564 ~ 51844042 (-)
LOC110520175 LOC106586279 coding upstream 195921 51956334 ~ 52075676 (-)
LOC110520181 adprh coding upstream 926510 52686923 ~ 52692178 (-)
LOC110520182 NA coding upstream 944539 52693956 ~ 52708816 (-)
gtdc1 gtdc1 coding upstream 1020368 52780781 ~ 52826389 (-)
G270682 NA non-coding downstream 91038 51665525 ~ 51668106 (-)
G270627 NA non-coding downstream 212308 51546561 ~ 51546836 (-)
G270626 NA non-coding downstream 212724 51545686 ~ 51546420 (-)
G270625 NA non-coding downstream 215831 51542803 ~ 51543313 (-)
G270732 NA non-coding upstream 10209 51770622 ~ 51771489 (-)
G270806 NA non-coding upstream 98641 51859054 ~ 51859385 (-)
G270810 NA non-coding upstream 101308 51861721 ~ 51862036 (-)
G270819 NA non-coding upstream 113557 51873970 ~ 51874196 (-)
LOC110520160 LOC106586095 other downstream 629834 51126600 ~ 51130404 (-)
LOC110520139 LOC106586251 other downstream 1316272 50440201 ~ 50442930 (-)
LOC110520121 LOC106581751 other downstream 1857606 49895327 ~ 49901575 (-)
G272713 LOC106586324 other upstream 1489513 53249926 ~ 53251084 (-)
G274344 LOC106586294 other upstream 2919505 54679918 ~ 54682805 (-)
LOC110520227 plekhm3 other upstream 3343081 55068639 ~ 55122013 (-)
G275250 NA other upstream 3649730 55410143 ~ 55411487 (-)

Expression


Co-expression Network