Gene
RNA
| Item | Value |
|---|---|
| gene id | G270484 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 51770610 ~ 51771617 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU307293 | True | 1008 | lncRNA | 0.37 | 1 | 51770610 | 51771617 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110520174 | LOC106586278 | coding | upstream | 3624 | 51759256 ~ 51766986 (+) |
| LOC110520171 | LOC106586099 | coding | upstream | 146024 | 51621354 ~ 51624586 (+) |
| LOC110520169 | il1rl1 | coding | upstream | 188043 | 51573980 ~ 51582567 (+) |
| LOC110520168 | LOC106586274 | coding | upstream | 237976 | 51504521 ~ 51532634 (+) |
| pdxka | LOC106586273 | coding | upstream | 270521 | 51490352 ~ 51500089 (+) |
| LOC110520177 | LOC106586282 | coding | downstream | 609314 | 52380931 ~ 52442609 (+) |
| LOC110520178 | LOC106582420 | coding | downstream | 737158 | 52508775 ~ 52567291 (+) |
| LOC110520179 | arl4c | coding | downstream | 813394 | 52585011 ~ 52587048 (+) |
| LOC110520180 | LOC106586330 | coding | downstream | 936754 | 52708371 ~ 52760376 (+) |
| LOC110520185 | NA | coding | downstream | 1103311 | 52874928 ~ 52942773 (+) |
| G270486 | NA | non-coding | upstream | 480 | 51769469 ~ 51770130 (+) |
| G270483 | NA | non-coding | upstream | 1542 | 51768123 ~ 51769068 (+) |
| G270497 | NA | non-coding | upstream | 17691 | 51752686 ~ 51752919 (+) |
| G270451 | NA | non-coding | upstream | 87184 | 51683178 ~ 51683426 (+) |
| G270374 | il1rl1 | non-coding | upstream | 161992 | 51552112 ~ 51608618 (+) |
| G270795 | NA | non-coding | downstream | 81130 | 51852747 ~ 51853056 (+) |
| G270862 | NA | non-coding | downstream | 161251 | 51932868 ~ 51936398 (+) |
| G271855 | NA | non-coding | downstream | 834657 | 52606274 ~ 52606501 (+) |
| G271858 | NA | non-coding | downstream | 836205 | 52607822 ~ 52608280 (+) |
| G271878 | NA | non-coding | downstream | 849154 | 52620771 ~ 52621041 (+) |
| G269291 | rap2a | other | upstream | 870333 | 50898589 ~ 50900277 (+) |
| LOC110520146 | ino80d | other | upstream | 1165794 | 50601983 ~ 50618761 (+) |
| hoxd3a | hoxd3 | other | upstream | 1587584 | 50162278 ~ 50184327 (+) |
| G267529 | NA | other | upstream | 1915108 | 49836617 ~ 49855502 (+) |
| acvr2aa | LOC106586327 | other | downstream | 1395335 | 53124656 ~ 53172428 (+) |
| LOC110520187 | LOC106586325 | other | downstream | 1449810 | 53174264 ~ 53235027 (+) |
| LOC110520190 | LOC106586322 | other | downstream | 1519713 | 53291284 ~ 53339392 (+) |
| G272965 | NA | other | downstream | 1877208 | 53648825 ~ 53652431 (+) |
| G273004 | LOC106586313 | other | downstream | 1885844 | 53657461 ~ 53658683 (+) |
