G270795


Basic Information

Item Value
gene id G270795
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 51852747 ~ 51853056 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU307639
gtagtaacattgttgtgtggtagacgggatactctgtctgttctttcctagcccacgtttgcagctgctgttgctaactcaacggctaggaggtatgacttctgtagtgaataagagttcaaagttcataccattcgcaaccaaagctcacgctgatgttggcttcgttctgtagttattatctgaaccattctgacatcggacagtcgtcctcacatcctcggaacaggtggttacattttcgtcaaggctttatatagtggagcgagaacggtgtgtttgaaaagttttagaaCCCATGTCTCTttac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU307639 True 310 lncRNA 0.44 1 51852747 51853056

Neighbor

gene id symbol gene type direction distance location
LOC110520174 LOC106586278 coding upstream 85761 51759256 ~ 51766986 (+)
LOC110520171 LOC106586099 coding upstream 228161 51621354 ~ 51624586 (+)
LOC110520169 il1rl1 coding upstream 270180 51573980 ~ 51582567 (+)
LOC110520168 LOC106586274 coding upstream 320113 51504521 ~ 51532634 (+)
pdxka LOC106586273 coding upstream 352658 51490352 ~ 51500089 (+)
LOC110520177 LOC106586282 coding downstream 527875 52380931 ~ 52442609 (+)
LOC110520178 LOC106582420 coding downstream 655719 52508775 ~ 52567291 (+)
LOC110520179 arl4c coding downstream 731955 52585011 ~ 52587048 (+)
LOC110520180 LOC106586330 coding downstream 855315 52708371 ~ 52760376 (+)
LOC110520185 NA coding downstream 1021872 52874928 ~ 52942773 (+)
G270484 NA non-coding upstream 81130 51770610 ~ 51771617 (+)
G270486 NA non-coding upstream 82617 51769469 ~ 51770130 (+)
G270483 NA non-coding upstream 83679 51768123 ~ 51769068 (+)
G270497 NA non-coding upstream 99828 51752686 ~ 51752919 (+)
G270451 NA non-coding upstream 169321 51683178 ~ 51683426 (+)
G270862 NA non-coding downstream 79812 51932868 ~ 51936398 (+)
G271855 NA non-coding downstream 753218 52606274 ~ 52606501 (+)
G271858 NA non-coding downstream 754766 52607822 ~ 52608280 (+)
G271878 NA non-coding downstream 767715 52620771 ~ 52621041 (+)
G271885 NA non-coding downstream 772046 52625102 ~ 52625348 (+)
G269291 rap2a other upstream 952470 50898589 ~ 50900277 (+)
LOC110520146 ino80d other upstream 1247931 50601983 ~ 50618761 (+)
hoxd3a hoxd3 other upstream 1669721 50162278 ~ 50184327 (+)
G267529 NA other upstream 1997245 49836617 ~ 49855502 (+)
acvr2aa LOC106586327 other downstream 1313896 53124656 ~ 53172428 (+)
LOC110520187 LOC106586325 other downstream 1368371 53174264 ~ 53235027 (+)
LOC110520190 LOC106586322 other downstream 1438274 53291284 ~ 53339392 (+)
G272965 NA other downstream 1795769 53648825 ~ 53652431 (+)
G273004 LOC106586313 other downstream 1804405 53657461 ~ 53658683 (+)

Expression


Co-expression Network