Gene
RNA
| Item | Value |
|---|---|
| gene id | G270862 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 51932868 ~ 51936398 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU307712 | True | 296 | lncRNA | 0.44 | 2 | 51932868 | 51936398 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110520174 | LOC106586278 | coding | upstream | 165882 | 51759256 ~ 51766986 (+) |
| LOC110520171 | LOC106586099 | coding | upstream | 308282 | 51621354 ~ 51624586 (+) |
| LOC110520169 | il1rl1 | coding | upstream | 350301 | 51573980 ~ 51582567 (+) |
| LOC110520168 | LOC106586274 | coding | upstream | 400234 | 51504521 ~ 51532634 (+) |
| pdxka | LOC106586273 | coding | upstream | 432779 | 51490352 ~ 51500089 (+) |
| LOC110520177 | LOC106586282 | coding | downstream | 444533 | 52380931 ~ 52442609 (+) |
| LOC110520178 | LOC106582420 | coding | downstream | 572377 | 52508775 ~ 52567291 (+) |
| LOC110520179 | arl4c | coding | downstream | 648613 | 52585011 ~ 52587048 (+) |
| LOC110520180 | LOC106586330 | coding | downstream | 771973 | 52708371 ~ 52760376 (+) |
| LOC110520185 | NA | coding | downstream | 938530 | 52874928 ~ 52942773 (+) |
| G270795 | NA | non-coding | upstream | 79812 | 51852747 ~ 51853056 (+) |
| G270484 | NA | non-coding | upstream | 161251 | 51770610 ~ 51771617 (+) |
| G270486 | NA | non-coding | upstream | 162738 | 51769469 ~ 51770130 (+) |
| G270483 | NA | non-coding | upstream | 163800 | 51768123 ~ 51769068 (+) |
| G270497 | NA | non-coding | upstream | 179949 | 51752686 ~ 51752919 (+) |
| G271855 | NA | non-coding | downstream | 669876 | 52606274 ~ 52606501 (+) |
| G271858 | NA | non-coding | downstream | 671424 | 52607822 ~ 52608280 (+) |
| G271878 | NA | non-coding | downstream | 684373 | 52620771 ~ 52621041 (+) |
| G271885 | NA | non-coding | downstream | 688704 | 52625102 ~ 52625348 (+) |
| G271900 | LOC100136012 | non-coding | downstream | 698697 | 52635095 ~ 52635354 (+) |
| G269291 | rap2a | other | upstream | 1032591 | 50898589 ~ 50900277 (+) |
| LOC110520146 | ino80d | other | upstream | 1328052 | 50601983 ~ 50618761 (+) |
| hoxd3a | hoxd3 | other | upstream | 1749842 | 50162278 ~ 50184327 (+) |
| G267529 | NA | other | upstream | 2077366 | 49836617 ~ 49855502 (+) |
| acvr2aa | LOC106586327 | other | downstream | 1230554 | 53124656 ~ 53172428 (+) |
| LOC110520187 | LOC106586325 | other | downstream | 1285029 | 53174264 ~ 53235027 (+) |
| LOC110520190 | LOC106586322 | other | downstream | 1354932 | 53291284 ~ 53339392 (+) |
| G272965 | NA | other | downstream | 1712427 | 53648825 ~ 53652431 (+) |
| G273004 | LOC106586313 | other | downstream | 1721063 | 53657461 ~ 53658683 (+) |
