Gene
RNA
| Item | Value |
|---|---|
| gene id | G271340 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 51933451 ~ 52019756 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| Tc1-like transporase |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU308215 | True | 363 | lncRNA | 0.42 | 3 | 51933451 | 52019756 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110520176 | LOC106586280 | coding | downstream | 90603 | 51817564 ~ 51844042 (-) |
| LOC100135875 | LOC100135875 | coding | downstream | 199152 | 51688835 ~ 51734299 (-) |
| LOC110520172 | LOC106586277 | coding | downstream | 252539 | 51630789 ~ 51680912 (-) |
| il1rl1 | il1rl1 | coding | downstream | 313975 | 51596933 ~ 51619476 (-) |
| LOC110520170 | il1rl1 | coding | downstream | 374112 | 51550697 ~ 51559339 (-) |
| LOC110520181 | adprh | coding | upstream | 667167 | 52686923 ~ 52692178 (-) |
| LOC110520182 | NA | coding | upstream | 685196 | 52693956 ~ 52708816 (-) |
| gtdc1 | gtdc1 | coding | upstream | 761025 | 52780781 ~ 52826389 (-) |
| zeb2a | LOC106586328 | coding | upstream | 808027 | 52827783 ~ 52875770 (-) |
| LOC110520193 | LOC106586318 | coding | upstream | 1364785 | 53384541 ~ 53394318 (-) |
| G270819 | NA | non-coding | downstream | 59255 | 51873970 ~ 51874196 (-) |
| G270810 | NA | non-coding | downstream | 71415 | 51861721 ~ 51862036 (-) |
| G270806 | NA | non-coding | downstream | 74066 | 51859054 ~ 51859385 (-) |
| G270732 | NA | non-coding | downstream | 161962 | 51770622 ~ 51771489 (-) |
| G271701 | NA | non-coding | upstream | 425546 | 52445302 ~ 52450465 (-) |
| G271901 | LOC100136012 | non-coding | upstream | 615394 | 52635150 ~ 52635378 (-) |
| G271911 | NA | non-coding | upstream | 619738 | 52639494 ~ 52639813 (-) |
| G271930 | NA | non-coding | upstream | 634121 | 52653877 ~ 52654107 (-) |
| G271959 | NA | non-coding | upstream | 652937 | 52672693 ~ 52673115 (-) |
| fgf9 | NA | other | downstream | 459312 | 51471899 ~ 51478510 (-) |
| LOC110520160 | LOC106586095 | other | downstream | 804141 | 51126600 ~ 51130404 (-) |
| LOC110520139 | LOC106586251 | other | downstream | 1490579 | 50440201 ~ 50442930 (-) |
| LOC110520121 | LOC106581751 | other | downstream | 2031913 | 49895327 ~ 49901575 (-) |
| G272713 | LOC106586324 | other | upstream | 1230170 | 53249926 ~ 53251084 (-) |
| G274344 | LOC106586294 | other | upstream | 2660162 | 54679918 ~ 54682805 (-) |
| LOC110520227 | plekhm3 | other | upstream | 3083738 | 55068639 ~ 55122013 (-) |
| G275250 | NA | other | upstream | 3390387 | 55410143 ~ 55411487 (-) |
