Gene
RNA
| Item | Value |
|---|---|
| gene id | G271855 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 52606274 ~ 52606501 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU308743 | True | 228 | lncRNA | 0.39 | 1 | 52606274 | 52606501 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110520179 | arl4c | coding | upstream | 19226 | 52585011 ~ 52587048 (+) |
| LOC110520178 | LOC106582420 | coding | upstream | 38983 | 52508775 ~ 52567291 (+) |
| LOC110520177 | LOC106586282 | coding | upstream | 163665 | 52380931 ~ 52442609 (+) |
| LOC110520174 | LOC106586278 | coding | upstream | 839288 | 51759256 ~ 51766986 (+) |
| LOC110520171 | LOC106586099 | coding | upstream | 981688 | 51621354 ~ 51624586 (+) |
| LOC110520180 | LOC106586330 | coding | downstream | 101870 | 52708371 ~ 52760376 (+) |
| LOC110520185 | NA | coding | downstream | 268427 | 52874928 ~ 52942773 (+) |
| acvr2aa | LOC106586327 | coding | downstream | 518155 | 53124656 ~ 53172428 (+) |
| LOC110520187 | LOC106586325 | coding | downstream | 567763 | 53174264 ~ 53235027 (+) |
| LOC110520189 | LOC106586324 | coding | downstream | 629042 | 53235543 ~ 53253493 (+) |
| G270862 | NA | non-coding | upstream | 669876 | 51932868 ~ 51936398 (+) |
| G270795 | NA | non-coding | upstream | 753218 | 51852747 ~ 51853056 (+) |
| G270484 | NA | non-coding | upstream | 834657 | 51770610 ~ 51771617 (+) |
| G270486 | NA | non-coding | upstream | 836144 | 51769469 ~ 51770130 (+) |
| G270483 | NA | non-coding | upstream | 837206 | 51768123 ~ 51769068 (+) |
| G271858 | NA | non-coding | downstream | 1321 | 52607822 ~ 52608280 (+) |
| G271878 | NA | non-coding | downstream | 14270 | 52620771 ~ 52621041 (+) |
| G271885 | NA | non-coding | downstream | 18601 | 52625102 ~ 52625348 (+) |
| G271900 | LOC100136012 | non-coding | downstream | 28594 | 52635095 ~ 52635354 (+) |
| G271910 | NA | non-coding | downstream | 33124 | 52639625 ~ 52639935 (+) |
| LOC110520169 | il1rl1 | other | upstream | 1027591 | 51573980 ~ 51582567 (+) |
| G269291 | rap2a | other | upstream | 1705997 | 50898589 ~ 50900277 (+) |
| LOC110520146 | ino80d | other | upstream | 2001458 | 50601983 ~ 50618761 (+) |
| hoxd3a | hoxd3 | other | upstream | 2423248 | 50162278 ~ 50184327 (+) |
| G267529 | NA | other | upstream | 2750772 | 49836617 ~ 49855502 (+) |
| LOC110520190 | LOC106586322 | other | downstream | 684829 | 53291284 ~ 53339392 (+) |
| G272965 | NA | other | downstream | 1042324 | 53648825 ~ 53652431 (+) |
| G273004 | LOC106586313 | other | downstream | 1050960 | 53657461 ~ 53658683 (+) |
