G271910


Basic Information

Item Value
gene id G271910
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 52639625 ~ 52639935 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU308798
cctttagcagggtagaaatttgacgaactgacttgttggaaaggtgccacattgaaagtcactgagctcttcagtgaggtcattctactgccaatgtttgtctatggagattgcatggctgtgtgctcgattttatacacctatcagccaaattcactaattttaacgggtgttcacatacttttgtatatatactgtagttgTTGTGCTACAGCAGAGCACCATATGTTGTCTCTATTATTGCCTGTGACCTAATGCCAGCAGGGTCAAAGCTCTATGGTTTTGAAGGTCACCCATTCTTCACTTGGCCC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU308798 True 311 lncRNA 0.42 1 52639625 52639935

Neighbor

gene id symbol gene type direction distance location
LOC110520179 arl4c coding upstream 52577 52585011 ~ 52587048 (+)
LOC110520178 LOC106582420 coding upstream 72334 52508775 ~ 52567291 (+)
LOC110520177 LOC106586282 coding upstream 197016 52380931 ~ 52442609 (+)
LOC110520174 LOC106586278 coding upstream 872639 51759256 ~ 51766986 (+)
LOC110520171 LOC106586099 coding upstream 1015039 51621354 ~ 51624586 (+)
LOC110520180 LOC106586330 coding downstream 68436 52708371 ~ 52760376 (+)
LOC110520185 NA coding downstream 234993 52874928 ~ 52942773 (+)
acvr2aa LOC106586327 coding downstream 484721 53124656 ~ 53172428 (+)
LOC110520187 LOC106586325 coding downstream 534329 53174264 ~ 53235027 (+)
LOC110520189 LOC106586324 coding downstream 595608 53235543 ~ 53253493 (+)
G271900 LOC100136012 non-coding upstream 4271 52635095 ~ 52635354 (+)
G271885 NA non-coding upstream 14277 52625102 ~ 52625348 (+)
G271878 NA non-coding upstream 18584 52620771 ~ 52621041 (+)
G271858 NA non-coding upstream 31345 52607822 ~ 52608280 (+)
G271855 NA non-coding upstream 33124 52606274 ~ 52606501 (+)
G271955 NA non-coding downstream 31453 52671388 ~ 52671864 (+)
G271982 NA non-coding downstream 52368 52692303 ~ 52695698 (+)
G272018 NA non-coding downstream 127990 52767925 ~ 52768246 (+)
G272020 NA non-coding downstream 129023 52768958 ~ 52769168 (+)
G272021 NA non-coding downstream 130064 52769999 ~ 52770239 (+)
LOC110520169 il1rl1 other upstream 1060942 51573980 ~ 51582567 (+)
G269291 rap2a other upstream 1739348 50898589 ~ 50900277 (+)
LOC110520146 ino80d other upstream 2034809 50601983 ~ 50618761 (+)
hoxd3a hoxd3 other upstream 2456599 50162278 ~ 50184327 (+)
G267529 NA other upstream 2784123 49836617 ~ 49855502 (+)
LOC110520190 LOC106586322 other downstream 651395 53291284 ~ 53339392 (+)
G272965 NA other downstream 1008890 53648825 ~ 53652431 (+)
G273004 LOC106586313 other downstream 1017526 53657461 ~ 53658683 (+)

Expression


Co-expression Network