G272018


Basic Information

Item Value
gene id G272018
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 52767925 ~ 52768246 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU308912
ccgctatcatccagaaggcgaggtcaaaacaagtgcatcaaagctgggaccgagagactgaaaaacagcttctatcccaaggccatcagactattaaatagccatcactagcacatagaggctgctgcctatatacatagactttaaatcactggctactttaataaatggaacactagtcactttaataatgtttacatatcatgcattactcatctcatatactgtattctatactgtcTTAGTCTAcaccgctctgacattgctcgtccatatatttatatgatcTTAATTACATTAATTTACttaaatgtgtgtatat

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU308912 True 322 lncRNA 0.36 1 52767925 52768246

Neighbor

gene id symbol gene type direction distance location
LOC110520180 LOC106586330 coding upstream 7549 52708371 ~ 52760376 (+)
LOC110520179 arl4c coding upstream 180877 52585011 ~ 52587048 (+)
LOC110520178 LOC106582420 coding upstream 200634 52508775 ~ 52567291 (+)
LOC110520177 LOC106586282 coding upstream 325316 52380931 ~ 52442609 (+)
LOC110520174 LOC106586278 coding upstream 1000939 51759256 ~ 51766986 (+)
LOC110520185 NA coding downstream 106682 52874928 ~ 52942773 (+)
acvr2aa LOC106586327 coding downstream 356410 53124656 ~ 53172428 (+)
LOC110520187 LOC106586325 coding downstream 406018 53174264 ~ 53235027 (+)
LOC110520189 LOC106586324 coding downstream 467297 53235543 ~ 53253493 (+)
kif5c LOC106586321 coding downstream 487170 53255416 ~ 53288980 (+)
G271982 NA non-coding upstream 72227 52692303 ~ 52695698 (+)
G271955 NA non-coding upstream 96061 52671388 ~ 52671864 (+)
G271910 NA non-coding upstream 127990 52639625 ~ 52639935 (+)
G271900 LOC100136012 non-coding upstream 132571 52635095 ~ 52635354 (+)
G271885 NA non-coding upstream 142577 52625102 ~ 52625348 (+)
G272020 NA non-coding downstream 712 52768958 ~ 52769168 (+)
G272021 NA non-coding downstream 1753 52769999 ~ 52770239 (+)
G272023 NA non-coding downstream 3273 52771519 ~ 52771737 (+)
G272028 NA non-coding downstream 8620 52776866 ~ 52777730 (+)
G272070 NA non-coding downstream 58589 52826835 ~ 52827045 (+)
LOC110520169 il1rl1 other upstream 1189242 51573980 ~ 51582567 (+)
G269291 rap2a other upstream 1867648 50898589 ~ 50900277 (+)
LOC110520146 ino80d other upstream 2163109 50601983 ~ 50618761 (+)
hoxd3a hoxd3 other upstream 2584899 50162278 ~ 50184327 (+)
G267529 NA other upstream 2912423 49836617 ~ 49855502 (+)
LOC110520190 LOC106586322 other downstream 523084 53291284 ~ 53339392 (+)
G272965 NA other downstream 880579 53648825 ~ 53652431 (+)
G273004 LOC106586313 other downstream 889215 53657461 ~ 53658683 (+)

Expression


Co-expression Network