Gene
RNA
| Item | Value |
|---|---|
| gene id | G272020 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 52768958 ~ 52769168 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU308914 | True | 211 | lncRNA | 0.41 | 1 | 52768958 | 52769168 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110520180 | LOC106586330 | coding | upstream | 8582 | 52708371 ~ 52760376 (+) |
| LOC110520179 | arl4c | coding | upstream | 181910 | 52585011 ~ 52587048 (+) |
| LOC110520178 | LOC106582420 | coding | upstream | 201667 | 52508775 ~ 52567291 (+) |
| LOC110520177 | LOC106586282 | coding | upstream | 326349 | 52380931 ~ 52442609 (+) |
| LOC110520174 | LOC106586278 | coding | upstream | 1001972 | 51759256 ~ 51766986 (+) |
| LOC110520185 | NA | coding | downstream | 105760 | 52874928 ~ 52942773 (+) |
| acvr2aa | LOC106586327 | coding | downstream | 355488 | 53124656 ~ 53172428 (+) |
| LOC110520187 | LOC106586325 | coding | downstream | 405096 | 53174264 ~ 53235027 (+) |
| LOC110520189 | LOC106586324 | coding | downstream | 466375 | 53235543 ~ 53253493 (+) |
| kif5c | LOC106586321 | coding | downstream | 486248 | 53255416 ~ 53288980 (+) |
| G272018 | NA | non-coding | upstream | 712 | 52767925 ~ 52768246 (+) |
| G271982 | NA | non-coding | upstream | 73260 | 52692303 ~ 52695698 (+) |
| G271955 | NA | non-coding | upstream | 97094 | 52671388 ~ 52671864 (+) |
| G271910 | NA | non-coding | upstream | 129023 | 52639625 ~ 52639935 (+) |
| G271900 | LOC100136012 | non-coding | upstream | 133604 | 52635095 ~ 52635354 (+) |
| G272021 | NA | non-coding | downstream | 831 | 52769999 ~ 52770239 (+) |
| G272023 | NA | non-coding | downstream | 2351 | 52771519 ~ 52771737 (+) |
| G272028 | NA | non-coding | downstream | 7698 | 52776866 ~ 52777730 (+) |
| G272070 | NA | non-coding | downstream | 57667 | 52826835 ~ 52827045 (+) |
| LOC110520169 | il1rl1 | other | upstream | 1190275 | 51573980 ~ 51582567 (+) |
| G269291 | rap2a | other | upstream | 1868681 | 50898589 ~ 50900277 (+) |
| LOC110520146 | ino80d | other | upstream | 2164142 | 50601983 ~ 50618761 (+) |
| hoxd3a | hoxd3 | other | upstream | 2585932 | 50162278 ~ 50184327 (+) |
| G267529 | NA | other | upstream | 2913456 | 49836617 ~ 49855502 (+) |
| LOC110520190 | LOC106586322 | other | downstream | 522162 | 53291284 ~ 53339392 (+) |
| G272965 | NA | other | downstream | 879657 | 53648825 ~ 53652431 (+) |
| G273004 | LOC106586313 | other | downstream | 888293 | 53657461 ~ 53658683 (+) |
