Gene
RNA
| Item | Value |
|---|---|
| gene id | G272408 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 52770332 ~ 52770543 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: tRNA:m(4)X modification enzyme TRM13 homolog isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU309323 | True | 212 | lncRNA | 0.43 | 1 | 52770332 | 52770543 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110520182 | NA | coding | downstream | 61586 | 52693956 ~ 52708816 (-) |
| LOC110520181 | adprh | coding | downstream | 78154 | 52686923 ~ 52692178 (-) |
| LOC110520175 | LOC106586279 | coding | downstream | 694656 | 51956334 ~ 52075676 (-) |
| LOC110520176 | LOC106586280 | coding | downstream | 927484 | 51817564 ~ 51844042 (-) |
| LOC100135875 | LOC100135875 | coding | downstream | 1036033 | 51688835 ~ 51734299 (-) |
| gtdc1 | gtdc1 | coding | upstream | 10238 | 52780781 ~ 52826389 (-) |
| zeb2a | LOC106586328 | coding | upstream | 57240 | 52827783 ~ 52875770 (-) |
| LOC110520193 | LOC106586318 | coding | upstream | 613998 | 53384541 ~ 53394318 (-) |
| LOC110520195 | LOC106586316 | coding | upstream | 767134 | 53537677 ~ 53562438 (-) |
| ubxd2 | ubxd2 | coding | upstream | 890557 | 53661100 ~ 53663978 (-) |
| G271968 | NA | non-coding | downstream | 87699 | 52675119 ~ 52682633 (-) |
| G271959 | NA | non-coding | downstream | 97217 | 52672693 ~ 52673115 (-) |
| G271930 | NA | non-coding | downstream | 116225 | 52653877 ~ 52654107 (-) |
| G271911 | NA | non-coding | downstream | 130519 | 52639494 ~ 52639813 (-) |
| G272412 | NA | non-coding | upstream | 2543 | 52773086 ~ 52773290 (-) |
| G272384 | NA | non-coding | upstream | 5050 | 52775593 ~ 52776534 (-) |
| G272417 | NA | non-coding | upstream | 18458 | 52789001 ~ 52789228 (-) |
| G272445 | NA | non-coding | upstream | 107215 | 52877758 ~ 52878101 (-) |
| G272446 | NA | non-coding | upstream | 107743 | 52878286 ~ 52878572 (-) |
| il1rl1 | il1rl1 | other | downstream | 1170102 | 51596933 ~ 51619476 (-) |
| fgf9 | NA | other | downstream | 1296193 | 51471899 ~ 51478510 (-) |
| LOC110520160 | LOC106586095 | other | downstream | 1641022 | 51126600 ~ 51130404 (-) |
| LOC110520139 | LOC106586251 | other | downstream | 2327460 | 50440201 ~ 50442930 (-) |
| G272713 | LOC106586324 | other | upstream | 479383 | 53249926 ~ 53251084 (-) |
| G274344 | LOC106586294 | other | upstream | 1909375 | 54679918 ~ 54682805 (-) |
| LOC110520227 | plekhm3 | other | upstream | 2332951 | 55068639 ~ 55122013 (-) |
| G275250 | NA | other | upstream | 2639600 | 55410143 ~ 55411487 (-) |
| si:dkey-91i10.3 | LOC106586420 | other | upstream | 4500239 | 57270782 ~ 57297762 (-) |
