G272023


Basic Information

Item Value
gene id G272023
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 52771519 ~ 52771737 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU308917
ATCCACATGTGCACATGTACATTTGCATAAACACATTTCCCCAGACCagtctttgtttttgtctttctttGAGTTTGTCATTCCATGCTGGAGGTGTTGTTTCAGTCTAGAATCAGACAGCCTCAGAACCAAGAGGACGGAACCAGGCTTTTTTCTGATGCGTGAAATTAATGTTGCTGTTCTTTGTTGATAATCCACCAGTTTCAAAATGCCCCAAAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU308917 True 219 lncRNA 0.41 1 52771519 52771737

Neighbor

gene id symbol gene type direction distance location
LOC110520180 LOC106586330 coding upstream 11143 52708371 ~ 52760376 (+)
LOC110520179 arl4c coding upstream 184471 52585011 ~ 52587048 (+)
LOC110520178 LOC106582420 coding upstream 204228 52508775 ~ 52567291 (+)
LOC110520177 LOC106586282 coding upstream 328910 52380931 ~ 52442609 (+)
LOC110520174 LOC106586278 coding upstream 1004533 51759256 ~ 51766986 (+)
LOC110520185 NA coding downstream 103191 52874928 ~ 52942773 (+)
acvr2aa LOC106586327 coding downstream 352919 53124656 ~ 53172428 (+)
LOC110520187 LOC106586325 coding downstream 402527 53174264 ~ 53235027 (+)
LOC110520189 LOC106586324 coding downstream 463806 53235543 ~ 53253493 (+)
kif5c LOC106586321 coding downstream 483679 53255416 ~ 53288980 (+)
G272021 NA non-coding upstream 1280 52769999 ~ 52770239 (+)
G272020 NA non-coding upstream 2351 52768958 ~ 52769168 (+)
G272018 NA non-coding upstream 3273 52767925 ~ 52768246 (+)
G271982 NA non-coding upstream 75821 52692303 ~ 52695698 (+)
G271955 NA non-coding upstream 99655 52671388 ~ 52671864 (+)
G272028 NA non-coding downstream 5129 52776866 ~ 52777730 (+)
G272070 NA non-coding downstream 55098 52826835 ~ 52827045 (+)
G272095 NA non-coding downstream 112575 52884312 ~ 52884541 (+)
G272096 NA non-coding downstream 114973 52886710 ~ 52886942 (+)
LOC110520169 il1rl1 other upstream 1192836 51573980 ~ 51582567 (+)
G269291 rap2a other upstream 1871242 50898589 ~ 50900277 (+)
LOC110520146 ino80d other upstream 2166703 50601983 ~ 50618761 (+)
hoxd3a hoxd3 other upstream 2588493 50162278 ~ 50184327 (+)
G267529 NA other upstream 2916017 49836617 ~ 49855502 (+)
LOC110520190 LOC106586322 other downstream 519593 53291284 ~ 53339392 (+)
G272965 NA other downstream 877088 53648825 ~ 53652431 (+)
G273004 LOC106586313 other downstream 885724 53657461 ~ 53658683 (+)

Expression


Co-expression Network