Gene
RNA
| Item | Value |
|---|---|
| gene id | G272412 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 52773086 ~ 52773290 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: sporozoite surface protein 2-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU309327 | True | 205 | lncRNA | 0.51 | 1 | 52773086 | 52773290 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110520182 | NA | coding | downstream | 64340 | 52693956 ~ 52708816 (-) |
| LOC110520181 | adprh | coding | downstream | 80908 | 52686923 ~ 52692178 (-) |
| LOC110520175 | LOC106586279 | coding | downstream | 697410 | 51956334 ~ 52075676 (-) |
| LOC110520176 | LOC106586280 | coding | downstream | 930238 | 51817564 ~ 51844042 (-) |
| LOC100135875 | LOC100135875 | coding | downstream | 1038787 | 51688835 ~ 51734299 (-) |
| gtdc1 | gtdc1 | coding | upstream | 7491 | 52780781 ~ 52826389 (-) |
| zeb2a | LOC106586328 | coding | upstream | 54493 | 52827783 ~ 52875770 (-) |
| LOC110520193 | LOC106586318 | coding | upstream | 611251 | 53384541 ~ 53394318 (-) |
| LOC110520195 | LOC106586316 | coding | upstream | 764387 | 53537677 ~ 53562438 (-) |
| ubxd2 | ubxd2 | coding | upstream | 887810 | 53661100 ~ 53663978 (-) |
| G272408 | NA | non-coding | downstream | 2543 | 52770332 ~ 52770543 (-) |
| G271968 | NA | non-coding | downstream | 90453 | 52675119 ~ 52682633 (-) |
| G271959 | NA | non-coding | downstream | 99971 | 52672693 ~ 52673115 (-) |
| G271930 | NA | non-coding | downstream | 118979 | 52653877 ~ 52654107 (-) |
| G272384 | NA | non-coding | upstream | 2303 | 52775593 ~ 52776534 (-) |
| G272417 | NA | non-coding | upstream | 15711 | 52789001 ~ 52789228 (-) |
| G272445 | NA | non-coding | upstream | 104468 | 52877758 ~ 52878101 (-) |
| G272446 | NA | non-coding | upstream | 104996 | 52878286 ~ 52878572 (-) |
| G272461 | NA | non-coding | upstream | 122107 | 52895397 ~ 52896059 (-) |
| il1rl1 | il1rl1 | other | downstream | 1172856 | 51596933 ~ 51619476 (-) |
| fgf9 | NA | other | downstream | 1298947 | 51471899 ~ 51478510 (-) |
| LOC110520160 | LOC106586095 | other | downstream | 1643776 | 51126600 ~ 51130404 (-) |
| LOC110520139 | LOC106586251 | other | downstream | 2330214 | 50440201 ~ 50442930 (-) |
| G272713 | LOC106586324 | other | upstream | 476636 | 53249926 ~ 53251084 (-) |
| G274344 | LOC106586294 | other | upstream | 1906628 | 54679918 ~ 54682805 (-) |
| LOC110520227 | plekhm3 | other | upstream | 2330204 | 55068639 ~ 55122013 (-) |
| G275250 | NA | other | upstream | 2636853 | 55410143 ~ 55411487 (-) |
| si:dkey-91i10.3 | LOC106586420 | other | upstream | 4497492 | 57270782 ~ 57297762 (-) |
