Gene
RNA
| Item | Value |
|---|---|
| gene id | G272558 |
| gene name | LOC106582599 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 53029486 ~ 53029746 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: uncharacterized protein LOC106582599 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU309473 | True | 261 | lncRNA | 0.56 | 1 | 53029486 | 53029746 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| zeb2a | LOC106586328 | coding | downstream | 153716 | 52827783 ~ 52875770 (-) |
| gtdc1 | gtdc1 | coding | downstream | 203097 | 52780781 ~ 52826389 (-) |
| LOC110520182 | NA | coding | downstream | 320740 | 52693956 ~ 52708816 (-) |
| LOC110520181 | adprh | coding | downstream | 337308 | 52686923 ~ 52692178 (-) |
| LOC110520175 | LOC106586279 | coding | downstream | 953810 | 51956334 ~ 52075676 (-) |
| LOC110520193 | LOC106586318 | coding | upstream | 354795 | 53384541 ~ 53394318 (-) |
| LOC110520195 | LOC106586316 | coding | upstream | 507931 | 53537677 ~ 53562438 (-) |
| ubxd2 | ubxd2 | coding | upstream | 631354 | 53661100 ~ 53663978 (-) |
| LOC110520198 | LOC106586311 | coding | upstream | 642019 | 53671765 ~ 53746869 (-) |
| rab3gap1 | LOC106586310 | coding | upstream | 787365 | 53817111 ~ 53864985 (-) |
| G272511 | NA | non-coding | downstream | 64538 | 52964743 ~ 52964948 (-) |
| G272509 | NA | non-coding | downstream | 67695 | 52961565 ~ 52961791 (-) |
| G272499 | NA | non-coding | downstream | 80781 | 52948105 ~ 52948705 (-) |
| G272491 | NA | non-coding | downstream | 91787 | 52937431 ~ 52937699 (-) |
| G272470 | NA | non-coding | downstream | 123711 | 52905493 ~ 52905775 (-) |
| G272560 | NA | non-coding | upstream | 1765 | 53031511 ~ 53031788 (-) |
| G272596 | NA | non-coding | upstream | 68921 | 53098667 ~ 53098877 (-) |
| G272613 | NA | non-coding | upstream | 85222 | 53114968 ~ 53115301 (-) |
| G272618 | NA | non-coding | upstream | 87999 | 53117745 ~ 53118228 (-) |
| G272660 | NA | non-coding | upstream | 144534 | 53174280 ~ 53174602 (-) |
| il1rl1 | il1rl1 | other | downstream | 1429256 | 51596933 ~ 51619476 (-) |
| fgf9 | NA | other | downstream | 1555347 | 51471899 ~ 51478510 (-) |
| LOC110520160 | LOC106586095 | other | downstream | 1900176 | 51126600 ~ 51130404 (-) |
| LOC110520139 | LOC106586251 | other | downstream | 2586614 | 50440201 ~ 50442930 (-) |
| G272713 | LOC106586324 | other | upstream | 220180 | 53249926 ~ 53251084 (-) |
| G274344 | LOC106586294 | other | upstream | 1650172 | 54679918 ~ 54682805 (-) |
| LOC110520227 | plekhm3 | other | upstream | 2073748 | 55068639 ~ 55122013 (-) |
| G275250 | NA | other | upstream | 2380397 | 55410143 ~ 55411487 (-) |
| si:dkey-91i10.3 | LOC106586420 | other | upstream | 4241036 | 57270782 ~ 57297762 (-) |
