G272618



Basic Information


Item Value
gene id G272618
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 53117745 ~ 53118228 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU309535
GGTGTGTTgtgacttttgactggtactgtatctacaATGCAAAatctatgtgtacgtgtgtgtagggtgtgtgtgtgtgtgttaacatgtgtctgtgcctgtgtgtgtgtctcttcacagtccccactgttccataaggtatgtttttaaaatctgattctactgcttgcatcagttacctgatgtggaatagagttccatgtagtcatggctctatgtagcactgtgcacctcccatagtctgctcTGGACTTTGGGTTTATGAAGTgtcctctggtggcatgtcttgtgtgtccgagctgtgtgctagtagtttaaacagacagcttggtgcattcagcaTCTCAATACATctcaaaaataaaaaagtattgatgaagccaatctctactctactttgagccatgacAGATTgaaatgcatattattaatgttagctctccgtgtacatttaagtgcctgccatgctgccctgttctgagcc

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU309535 True 484 lncRNA 0.43 1 53117745 53118228

Neighbor


gene id symbol gene type direction distance location
zeb2a LOC106586328 coding downstream 241975 52827783 ~ 52875770 (-)
gtdc1 gtdc1 coding downstream 291356 52780781 ~ 52826389 (-)
LOC110520182 NA coding downstream 408999 52693956 ~ 52708816 (-)
LOC110520181 adprh coding downstream 425567 52686923 ~ 52692178 (-)
LOC110520175 LOC106586279 coding downstream 1042069 51956334 ~ 52075676 (-)
LOC110520193 LOC106586318 coding upstream 266313 53384541 ~ 53394318 (-)
LOC110520195 LOC106586316 coding upstream 419449 53537677 ~ 53562438 (-)
ubxd2 ubxd2 coding upstream 542872 53661100 ~ 53663978 (-)
LOC110520198 LOC106586311 coding upstream 553537 53671765 ~ 53746869 (-)
rab3gap1 LOC106586310 coding upstream 698883 53817111 ~ 53864985 (-)
G272613 NA non-coding downstream 2444 53114968 ~ 53115301 (-)
G272596 NA non-coding downstream 18868 53098667 ~ 53098877 (-)
G272560 NA non-coding downstream 85957 53031511 ~ 53031788 (-)
G272558 LOC106582599 non-coding downstream 87999 53029486 ~ 53029746 (-)
G272511 NA non-coding downstream 152797 52964743 ~ 52964948 (-)
G272660 NA non-coding upstream 56052 53174280 ~ 53174602 (-)
G272665 NA non-coding upstream 62203 53180431 ~ 53180745 (-)
G272672 NA non-coding upstream 70003 53188231 ~ 53188445 (-)
G272673 NA non-coding upstream 70808 53189036 ~ 53189267 (-)
G272659 NA non-coding upstream 100625 53218853 ~ 53219510 (-)
il1rl1 il1rl1 other downstream 1517515 51596933 ~ 51619476 (-)
fgf9 NA other downstream 1643606 51471899 ~ 51478510 (-)
LOC110520160 LOC106586095 other downstream 1988435 51126600 ~ 51130404 (-)
LOC110520139 LOC106586251 other downstream 2674873 50440201 ~ 50442930 (-)
G272713 LOC106586324 other upstream 131698 53249926 ~ 53251084 (-)
G274344 LOC106586294 other upstream 1561690 54679918 ~ 54682805 (-)
LOC110520227 plekhm3 other upstream 1985266 55068639 ~ 55122013 (-)
G275250 NA other upstream 2291915 55410143 ~ 55411487 (-)
si:dkey-91i10.3 LOC106586420 other upstream 4152554 57270782 ~ 57297762 (-)

Expression



Co-expression Network