G272258


Basic Information

Item Value
gene id G272258
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 53119173 ~ 53119495 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU309159
atacatcatttgacatgtttctacaaactgtaacagaactttttgacttttcgtctggacccagtgctcgcgcctcatgaatttggatttgtgaactaaacgaggcaaacaaaaaggaggtatttggacataaatgatggactttatcgaacaaaacaaacatttattgtggaactgggattcctgggagtgcattctgatgaagatcatcaaagttaagtgaatatttataatgctatttctgacttctgttgactccacaacatggcgggtatctgtatggcttgtttttgtgtctgagcgctgtactcagattattgcat

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU309159 True 323 lncRNA 0.38 1 53119173 53119495

Neighbor

gene id symbol gene type direction distance location
LOC110520185 NA coding upstream 176400 52874928 ~ 52942773 (+)
LOC110520180 LOC106586330 coding upstream 358797 52708371 ~ 52760376 (+)
LOC110520179 arl4c coding upstream 532125 52585011 ~ 52587048 (+)
LOC110520178 LOC106582420 coding upstream 551882 52508775 ~ 52567291 (+)
LOC110520177 LOC106586282 coding upstream 676564 52380931 ~ 52442609 (+)
acvr2aa LOC106586327 coding downstream 5161 53124656 ~ 53172428 (+)
LOC110520187 LOC106586325 coding downstream 54769 53174264 ~ 53235027 (+)
LOC110520189 LOC106586324 coding downstream 116048 53235543 ~ 53253493 (+)
kif5c LOC106586321 coding downstream 135921 53255416 ~ 53288980 (+)
LOC110520190 LOC106586322 coding downstream 171789 53291284 ~ 53339392 (+)
G272257 NA non-coding upstream 808 53117965 ~ 53118365 (+)
G272256 NA non-coding upstream 1711 53117228 ~ 53117462 (+)
G272185 NA non-coding upstream 102897 53015850 ~ 53016276 (+)
G272158 NA non-coding upstream 140028 52978940 ~ 52979145 (+)
G272135 NA non-coding upstream 169960 52948997 ~ 52949213 (+)
G272283 NA non-coding downstream 53341 53172836 ~ 53173171 (+)
G272290 NA non-coding downstream 66069 53185564 ~ 53185777 (+)
G272308 NA non-coding downstream 97218 53216713 ~ 53217028 (+)
LOC110520191 LOC106586320 non-coding downstream 228190 53347656 ~ 53375674 (+)
LOC110520169 il1rl1 other upstream 1540490 51573980 ~ 51582567 (+)
G269291 rap2a other upstream 2218896 50898589 ~ 50900277 (+)
LOC110520146 ino80d other upstream 2514357 50601983 ~ 50618761 (+)
hoxd3a hoxd3 other upstream 2936147 50162278 ~ 50184327 (+)
G267529 NA other upstream 3263671 49836617 ~ 49855502 (+)
G272965 NA other downstream 529330 53648825 ~ 53652431 (+)
G273004 LOC106586313 other downstream 537966 53657461 ~ 53658683 (+)

Expression


Co-expression Network