Gene
RNA
| Item | Value |
|---|---|
| gene id | G273298 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 53397079 ~ 53397297 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU310297 | True | 219 | lncRNA | 0.35 | 1 | 53397079 | 53397297 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110520193 | LOC106586318 | coding | downstream | 2761 | 53384541 ~ 53394318 (-) |
| zeb2a | LOC106586328 | coding | downstream | 521309 | 52827783 ~ 52875770 (-) |
| gtdc1 | gtdc1 | coding | downstream | 570690 | 52780781 ~ 52826389 (-) |
| LOC110520182 | NA | coding | downstream | 688333 | 52693956 ~ 52708816 (-) |
| LOC110520181 | adprh | coding | downstream | 704901 | 52686923 ~ 52692178 (-) |
| LOC110520195 | LOC106586316 | coding | upstream | 140380 | 53537677 ~ 53562438 (-) |
| ubxd2 | ubxd2 | coding | upstream | 263803 | 53661100 ~ 53663978 (-) |
| LOC110520198 | LOC106586311 | coding | upstream | 274468 | 53671765 ~ 53746869 (-) |
| rab3gap1 | LOC106586310 | coding | upstream | 419814 | 53817111 ~ 53864985 (-) |
| LOC110520203 | LOC106586308 | coding | upstream | 486401 | 53883698 ~ 53893788 (-) |
| G272832 | NA | non-coding | downstream | 21558 | 53373540 ~ 53375521 (-) |
| G272774 | NA | non-coding | downstream | 59409 | 53336680 ~ 53337670 (-) |
| G272729 | NA | non-coding | downstream | 72742 | 53271553 ~ 53324337 (-) |
| G272741 | NA | non-coding | downstream | 105999 | 53288343 ~ 53291080 (-) |
| G272659 | NA | non-coding | downstream | 177569 | 53218853 ~ 53219510 (-) |
| G273454 | NA | non-coding | upstream | 194142 | 53591439 ~ 53591680 (-) |
| G273464 | NA | non-coding | upstream | 204781 | 53602078 ~ 53602367 (-) |
| G273493 | LOC106586314 | non-coding | upstream | 248636 | 53645933 ~ 53651951 (-) |
| G273523 | NA | non-coding | upstream | 369063 | 53766360 ~ 53766580 (-) |
| G273584 | NA | non-coding | upstream | 471412 | 53868709 ~ 53869460 (-) |
| G272713 | LOC106586324 | other | downstream | 145995 | 53249926 ~ 53251084 (-) |
| il1rl1 | il1rl1 | other | downstream | 1796849 | 51596933 ~ 51619476 (-) |
| fgf9 | NA | other | downstream | 1922940 | 51471899 ~ 51478510 (-) |
| LOC110520160 | LOC106586095 | other | downstream | 2267769 | 51126600 ~ 51130404 (-) |
| G274344 | LOC106586294 | other | upstream | 1282621 | 54679918 ~ 54682805 (-) |
| LOC110520227 | plekhm3 | other | upstream | 1706197 | 55068639 ~ 55122013 (-) |
| G275250 | NA | other | upstream | 2012846 | 55410143 ~ 55411487 (-) |
| si:dkey-91i10.3 | LOC106586420 | other | upstream | 3873485 | 57270782 ~ 57297762 (-) |
| G277673 | LOC106586423 | other | upstream | 4005687 | 57402984 ~ 57403575 (-) |
