Gene
RNA
| Item | Value |
|---|---|
| gene id | G273113 |
| gene name | LOC106586310 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 53857406 ~ 53859972 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| rab3 GTPase-activating protein catalytic subunit-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU310095 | True | 592 | lncRNA | 0.48 | 2 | 53857406 | 53859972 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| parp14rs3 | LOC106586314 | coding | upstream | 210981 | 53631769 ~ 53646425 (+) |
| LOC110520196 | NA | coding | upstream | 228121 | 53600172 ~ 53629285 (+) |
| LOC110520194 | LOC106586317 | coding | upstream | 407524 | 53436028 ~ 53449882 (+) |
| LOC110520191 | LOC106586320 | coding | upstream | 481732 | 53347656 ~ 53375674 (+) |
| LOC110520190 | LOC106586322 | coding | upstream | 518014 | 53291284 ~ 53339392 (+) |
| LOC110520200 | LOC106586309 | coding | downstream | 5496 | 53865468 ~ 53869538 (+) |
| LOC110520202 | LOC106586307 | coding | downstream | 10778 | 53870750 ~ 53883922 (+) |
| LOC110520204 | LOC106586306 | coding | downstream | 44338 | 53904310 ~ 53990481 (+) |
| LOC110520205 | LOC106586291 | coding | downstream | 185005 | 54044977 ~ 54149088 (+) |
| LOC110520208 | LOC106586301 | coding | downstream | 348903 | 54208875 ~ 54317829 (+) |
| G273093 | LOC106586310 | non-coding | upstream | 38869 | 53817120 ~ 53818537 (+) |
| G273056 | NA | non-coding | upstream | 100624 | 53756576 ~ 53756782 (+) |
| G273039 | NA | non-coding | upstream | 126145 | 53730078 ~ 53731261 (+) |
| G273038 | NA | non-coding | upstream | 129171 | 53727955 ~ 53728235 (+) |
| G273028 | NA | non-coding | upstream | 140472 | 53716670 ~ 53716934 (+) |
| G273119 | NA | non-coding | downstream | 5183 | 53865155 ~ 53865423 (+) |
| G273173 | NA | non-coding | downstream | 102049 | 53962021 ~ 54025301 (+) |
| G273252 | NA | non-coding | downstream | 220811 | 54080783 ~ 54081079 (+) |
| G273253 | NA | non-coding | downstream | 221176 | 54081148 ~ 54081395 (+) |
| G273254 | NA | non-coding | downstream | 223567 | 54083539 ~ 54083773 (+) |
| G273094 | LOC106586310 | other | upstream | 15789 | 53841264 ~ 53841617 (+) |
| G273004 | LOC106586313 | other | upstream | 198723 | 53657461 ~ 53658683 (+) |
| G272965 | NA | other | upstream | 204975 | 53648825 ~ 53652431 (+) |
| LOC110520187 | LOC106586325 | other | upstream | 634141 | 53174264 ~ 53235027 (+) |
| G274592 | NA | other | downstream | 1014427 | 54874399 ~ 54875115 (+) |
| LOC110520231 | dbr1 | other | downstream | 1514574 | 55371759 ~ 55375526 (+) |
| G275542 | LOC106586374 | other | downstream | 2040222 | 55900194 ~ 55900743 (+) |
| G275553 | LOC107595854 | other | downstream | 2055357 | 55915329 ~ 55916133 (+) |
| G277296 | NA | other | downstream | 3404595 | 57264567 ~ 57264892 (+) |
