G273119


Basic Information

Item Value
gene id G273119
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 53865155 ~ 53865423 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU310104
gtagtagaaaaATATATCTTACTTTTACAACTTAGTCTTGGAATTAATATCAGTCTGCATATTGTCAAACACTCAAATCAGAtacaatcaaatgttatttatcacatgcgcagaatacaacaagtgtagcccttacagagaaatgcttacttacaagcccttaaccaccaaTGCAGTTACTTAACCCGTTTTTGCAGATACAATTATTGCTTTGATACattttgtaatatatttgttattaAAGGTGATATGATGGCATAATAATAAGC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU310104 True 269 lncRNA 0.31 1 53865155 53865423

Neighbor

gene id symbol gene type direction distance location
parp14rs3 LOC106586314 coding upstream 218730 53631769 ~ 53646425 (+)
LOC110520196 NA coding upstream 235870 53600172 ~ 53629285 (+)
LOC110520194 LOC106586317 coding upstream 415273 53436028 ~ 53449882 (+)
LOC110520191 LOC106586320 coding upstream 489481 53347656 ~ 53375674 (+)
LOC110520190 LOC106586322 coding upstream 525763 53291284 ~ 53339392 (+)
LOC110520200 LOC106586309 coding downstream 45 53865468 ~ 53869538 (+)
LOC110520202 LOC106586307 coding downstream 5327 53870750 ~ 53883922 (+)
LOC110520204 LOC106586306 coding downstream 38887 53904310 ~ 53990481 (+)
LOC110520205 LOC106586291 coding downstream 179554 54044977 ~ 54149088 (+)
LOC110520208 LOC106586301 coding downstream 343452 54208875 ~ 54317829 (+)
G273113 LOC106586310 non-coding upstream 5183 53857406 ~ 53859972 (+)
G273093 LOC106586310 non-coding upstream 46618 53817120 ~ 53818537 (+)
G273056 NA non-coding upstream 108373 53756576 ~ 53756782 (+)
G273039 NA non-coding upstream 133894 53730078 ~ 53731261 (+)
G273038 NA non-coding upstream 136920 53727955 ~ 53728235 (+)
G273173 NA non-coding downstream 96598 53962021 ~ 54025301 (+)
G273252 NA non-coding downstream 215360 54080783 ~ 54081079 (+)
G273253 NA non-coding downstream 215725 54081148 ~ 54081395 (+)
G273254 NA non-coding downstream 218116 54083539 ~ 54083773 (+)
G273257 NA non-coding downstream 221728 54087151 ~ 54087491 (+)
G273094 LOC106586310 other upstream 23538 53841264 ~ 53841617 (+)
G273004 LOC106586313 other upstream 206472 53657461 ~ 53658683 (+)
G272965 NA other upstream 212724 53648825 ~ 53652431 (+)
LOC110520187 LOC106586325 other upstream 641890 53174264 ~ 53235027 (+)
G274592 NA other downstream 1008976 54874399 ~ 54875115 (+)
LOC110520231 dbr1 other downstream 1509123 55371759 ~ 55375526 (+)
G275542 LOC106586374 other downstream 2034771 55900194 ~ 55900743 (+)
G275553 LOC107595854 other downstream 2049906 55915329 ~ 55916133 (+)
G277296 NA other downstream 3399144 57264567 ~ 57264892 (+)

Expression


Co-expression Network