Gene
RNA
| Item | Value |
|---|---|
| gene id | G273253 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 54081148 ~ 54081395 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU310252 | True | 248 | lncRNA | 0.38 | 1 | 54081148 | 54081395 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110520204 | LOC106586306 | coding | upstream | 90667 | 53904310 ~ 53990481 (+) |
| LOC110520202 | LOC106586307 | coding | upstream | 197226 | 53870750 ~ 53883922 (+) |
| LOC110520200 | LOC106586309 | coding | upstream | 211610 | 53865468 ~ 53869538 (+) |
| parp14rs3 | LOC106586314 | coding | upstream | 434723 | 53631769 ~ 53646425 (+) |
| LOC110520196 | NA | coding | upstream | 451863 | 53600172 ~ 53629285 (+) |
| LOC110520208 | LOC106586301 | coding | downstream | 127480 | 54208875 ~ 54317829 (+) |
| LOC110520209 | e41l5 | coding | downstream | 237288 | 54318683 ~ 54365397 (+) |
| LOC110520210 | LOC106586303 | coding | downstream | 284534 | 54365929 ~ 54437361 (+) |
| LOC110520220 | LOC106586295 | coding | downstream | 587455 | 54668850 ~ 54672399 (+) |
| LOC110520222 | LOC106586294 | coding | downstream | 591837 | 54673232 ~ 54689498 (+) |
| G273252 | NA | non-coding | upstream | 69 | 54080783 ~ 54081079 (+) |
| G273173 | NA | non-coding | upstream | 55847 | 53962021 ~ 54025301 (+) |
| G273119 | NA | non-coding | upstream | 215725 | 53865155 ~ 53865423 (+) |
| G273113 | LOC106586310 | non-coding | upstream | 221176 | 53857406 ~ 53859972 (+) |
| G273093 | LOC106586310 | non-coding | upstream | 262611 | 53817120 ~ 53818537 (+) |
| G273254 | NA | non-coding | downstream | 2144 | 54083539 ~ 54083773 (+) |
| G273257 | NA | non-coding | downstream | 5756 | 54087151 ~ 54087491 (+) |
| G273261 | NA | non-coding | downstream | 11123 | 54092518 ~ 54094138 (+) |
| G273270 | NA | non-coding | downstream | 31793 | 54113188 ~ 54113407 (+) |
| G273276 | NA | non-coding | downstream | 40330 | 54121725 ~ 54121953 (+) |
| G273094 | LOC106586310 | other | upstream | 239531 | 53841264 ~ 53841617 (+) |
| G273004 | LOC106586313 | other | upstream | 422465 | 53657461 ~ 53658683 (+) |
| G272965 | NA | other | upstream | 428717 | 53648825 ~ 53652431 (+) |
| LOC110520190 | LOC106586322 | other | upstream | 744622 | 53291284 ~ 53339392 (+) |
| LOC110520187 | LOC106586325 | other | upstream | 857883 | 53174264 ~ 53235027 (+) |
| G274592 | NA | other | downstream | 793004 | 54874399 ~ 54875115 (+) |
| LOC110520231 | dbr1 | other | downstream | 1293151 | 55371759 ~ 55375526 (+) |
| G275542 | LOC106586374 | other | downstream | 1818799 | 55900194 ~ 55900743 (+) |
| G275553 | LOC107595854 | other | downstream | 1833934 | 55915329 ~ 55916133 (+) |
| G277296 | NA | other | downstream | 3183172 | 57264567 ~ 57264892 (+) |
