Gene
RNA
| Item | Value |
|---|---|
| gene id | G273770 |
| gene name | LOC106586291 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 54146010 ~ 54146832 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| parathyroid hormone 2 receptor-like isoform X2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU310815 | True | 823 | lncRNA | 0.50 | 1 | 54146010 | 54146832 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110520203 | LOC106586308 | coding | downstream | 252222 | 53883698 ~ 53893788 (-) |
| rab3gap1 | LOC106586310 | coding | downstream | 281025 | 53817111 ~ 53864985 (-) |
| LOC110520198 | LOC106586311 | coding | downstream | 399141 | 53671765 ~ 53746869 (-) |
| ubxd2 | ubxd2 | coding | downstream | 482032 | 53661100 ~ 53663978 (-) |
| LOC110520195 | LOC106586316 | coding | downstream | 583572 | 53537677 ~ 53562438 (-) |
| LOC110520207 | LOC106586304 | coding | upstream | 34840 | 54181672 ~ 54191829 (-) |
| LOC110520212 | NA | coding | upstream | 278726 | 54425558 ~ 54429214 (-) |
| LOC110520213 | ube2f | coding | upstream | 357232 | 54504064 ~ 54594080 (-) |
| LOC110520216 | LOC106586300 | coding | upstream | 470696 | 54617528 ~ 54624544 (-) |
| LOC110520218 | NA | coding | upstream | 486906 | 54633738 ~ 54636478 (-) |
| G273752 | NA | non-coding | downstream | 33755 | 54112052 ~ 54112255 (-) |
| G273743 | NA | non-coding | downstream | 50823 | 54094872 ~ 54095187 (-) |
| G273735 | NA | non-coding | downstream | 61420 | 54084369 ~ 54084590 (-) |
| G273731 | NA | non-coding | downstream | 66020 | 54079779 ~ 54079990 (-) |
| G273686 | NA | non-coding | downstream | 120690 | 54018454 ~ 54025320 (-) |
| G273790 | NA | non-coding | upstream | 18610 | 54165442 ~ 54165974 (-) |
| G273794 | NA | non-coding | upstream | 22350 | 54169182 ~ 54169386 (-) |
| G273798 | NA | non-coding | upstream | 26166 | 54172998 ~ 54173256 (-) |
| G274126 | NA | non-coding | upstream | 28018 | 54174850 ~ 54229177 (-) |
| G272713 | LOC106586324 | other | downstream | 894926 | 53249926 ~ 53251084 (-) |
| LOC110520182 | NA | other | downstream | 1437194 | 52693956 ~ 52708816 (-) |
| il1rl1 | il1rl1 | other | downstream | 2545780 | 51596933 ~ 51619476 (-) |
| fgf9 | NA | other | downstream | 2671871 | 51471899 ~ 51478510 (-) |
| LOC110520160 | LOC106586095 | other | downstream | 3016700 | 51126600 ~ 51130404 (-) |
| G274344 | LOC106586294 | other | upstream | 533086 | 54679918 ~ 54682805 (-) |
| LOC110520227 | plekhm3 | other | upstream | 956662 | 55068639 ~ 55122013 (-) |
| G275250 | NA | other | upstream | 1263311 | 55410143 ~ 55411487 (-) |
| si:dkey-91i10.3 | LOC106586420 | other | upstream | 3123950 | 57270782 ~ 57297762 (-) |
| G277673 | LOC106586423 | other | upstream | 3256152 | 57402984 ~ 57403575 (-) |
