Gene
RNA
| Item | Value |
|---|---|
| gene id | G273790 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 54165442 ~ 54165974 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU310835 | True | 533 | lncRNA | 0.41 | 1 | 54165442 | 54165974 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110520203 | LOC106586308 | coding | downstream | 271654 | 53883698 ~ 53893788 (-) |
| rab3gap1 | LOC106586310 | coding | downstream | 300457 | 53817111 ~ 53864985 (-) |
| LOC110520198 | LOC106586311 | coding | downstream | 418573 | 53671765 ~ 53746869 (-) |
| ubxd2 | ubxd2 | coding | downstream | 501464 | 53661100 ~ 53663978 (-) |
| LOC110520195 | LOC106586316 | coding | downstream | 603004 | 53537677 ~ 53562438 (-) |
| LOC110520207 | LOC106586304 | coding | upstream | 15698 | 54181672 ~ 54191829 (-) |
| LOC110520212 | NA | coding | upstream | 259584 | 54425558 ~ 54429214 (-) |
| LOC110520213 | ube2f | coding | upstream | 338090 | 54504064 ~ 54594080 (-) |
| LOC110520216 | LOC106586300 | coding | upstream | 451554 | 54617528 ~ 54624544 (-) |
| LOC110520218 | NA | coding | upstream | 467764 | 54633738 ~ 54636478 (-) |
| G273770 | LOC106586291 | non-coding | downstream | 18610 | 54146010 ~ 54146832 (-) |
| G273752 | NA | non-coding | downstream | 53187 | 54112052 ~ 54112255 (-) |
| G273743 | NA | non-coding | downstream | 70255 | 54094872 ~ 54095187 (-) |
| G273735 | NA | non-coding | downstream | 80852 | 54084369 ~ 54084590 (-) |
| G273731 | NA | non-coding | downstream | 85452 | 54079779 ~ 54079990 (-) |
| G273794 | NA | non-coding | upstream | 3208 | 54169182 ~ 54169386 (-) |
| G273798 | NA | non-coding | upstream | 7024 | 54172998 ~ 54173256 (-) |
| G274126 | NA | non-coding | upstream | 8876 | 54174850 ~ 54229177 (-) |
| G274198 | NA | non-coding | upstream | 115608 | 54281582 ~ 54289271 (-) |
| G272713 | LOC106586324 | other | downstream | 914358 | 53249926 ~ 53251084 (-) |
| LOC110520182 | NA | other | downstream | 1456626 | 52693956 ~ 52708816 (-) |
| il1rl1 | il1rl1 | other | downstream | 2565212 | 51596933 ~ 51619476 (-) |
| fgf9 | NA | other | downstream | 2691303 | 51471899 ~ 51478510 (-) |
| LOC110520160 | LOC106586095 | other | downstream | 3036132 | 51126600 ~ 51130404 (-) |
| G274344 | LOC106586294 | other | upstream | 513944 | 54679918 ~ 54682805 (-) |
| LOC110520227 | plekhm3 | other | upstream | 937520 | 55068639 ~ 55122013 (-) |
| G275250 | NA | other | upstream | 1244169 | 55410143 ~ 55411487 (-) |
| si:dkey-91i10.3 | LOC106586420 | other | upstream | 3104808 | 57270782 ~ 57297762 (-) |
| G277673 | LOC106586423 | other | upstream | 3237010 | 57402984 ~ 57403575 (-) |
