G274057


Basic Information

Item Value
gene id G274057
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 54647602 ~ 54660246 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU311143
tttctagcctgtctatcaaTGGGTAACAGAGTTGACATGTTACGCTCGACCTGCTCAGTttaccaccacaaaacaccagcaaATTGCCAAAAATAGCacaaccagctcacctgctttcacactatgatttgactatgttcaatgttttttgttgagagaatgccaagaagaaaaaatatatattatacttTCACCATTTTAGTTCACGTAAAAGGGTTGACTTTAAAATGAAGGACAGACGCAAATGAaccactaatcacatgaaattatTAATAATCTTCGGAAataactttgtcaaagcaacaaattACTATGGCTTTACAATTATGGTGAAAAAAGAGCTGACTATGTGGATGACTATGAGACTCAGCTCAATAAGAATACTCTGGTGAATCCTGCTGGCATGTGTTTGGGGGTATAATCATGGCATTTCTGCAGAAGTGAAGTCTCAGTTCATTGAATGAAACCTTCTAGCCAATACAATTTCATTAATTGCTGAGGGGAGTCTTAAAATAAGTGTCCAGGGAAAATCTCACTGttaaaagttcatattctgttaatACCCAAATAATGTTATTGACTCATCCTTtactcgtatttgtggccaaagcataaattggagaaaaGACACTAATGGACAGTCACTTTAAGAGGAATTCTTCCAAAGCAAAGTTTTCAATAATTTTGCCATTCGAGTGGCCGGTTAAGTGATAGCATATGTCACTGAGGATTACT

Function

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU311143 True 735 lncRNA 0.36 2 54647602 54660246

Neighbor

gene id symbol gene type direction distance location
LOC110520210 LOC106586303 coding upstream 210241 54365929 ~ 54437361 (+)
LOC110520209 e41l5 coding upstream 282205 54318683 ~ 54365397 (+)
LOC110520208 LOC106586301 coding upstream 329773 54208875 ~ 54317829 (+)
LOC110520205 LOC106586291 coding upstream 498514 54044977 ~ 54149088 (+)
LOC110520204 LOC106586306 coding upstream 657121 53904310 ~ 53990481 (+)
LOC110520220 LOC106586295 coding downstream 8604 54668850 ~ 54672399 (+)
LOC110520222 LOC106586294 coding downstream 12986 54673232 ~ 54689498 (+)
LOC110520223 klf7 coding downstream 199274 54859520 ~ 54931543 (+)
creb1b creb1 coding downstream 333198 54993444 ~ 55001733 (+)
LOC110520225 LOC106586338 coding downstream 361484 55021730 ~ 55045043 (+)
G273989 NA non-coding upstream 141797 54504114 ~ 54505805 (+)
G273801 NA non-coding upstream 472795 54174571 ~ 54174807 (+)
G273287 NA non-coding upstream 510985 54136282 ~ 54136617 (+)
G274449 NA non-coding downstream 66551 54726797 ~ 54727010 (+)
G274458 NA non-coding downstream 73123 54733369 ~ 54733684 (+)
G274459 NA non-coding downstream 74052 54734298 ~ 54788327 (+)
G274525 NA non-coding downstream 137032 54797278 ~ 54797495 (+)
G273094 LOC106586310 other upstream 805985 53841264 ~ 53841617 (+)
G273004 LOC106586313 other upstream 988919 53657461 ~ 53658683 (+)
G272965 NA other upstream 995171 53648825 ~ 53652431 (+)
LOC110520190 LOC106586322 other upstream 1311076 53291284 ~ 53339392 (+)
LOC110520187 LOC106586325 other upstream 1424337 53174264 ~ 53235027 (+)
G274592 NA other downstream 214153 54874399 ~ 54875115 (+)
LOC110520231 dbr1 other downstream 714300 55371759 ~ 55375526 (+)
G275542 LOC106586374 other downstream 1239948 55900194 ~ 55900743 (+)
G275553 LOC107595854 other downstream 1255083 55915329 ~ 55916133 (+)
G277296 NA other downstream 2604321 57264567 ~ 57264892 (+)

Expression


Co-expression Network