G274344 (LOC106586294)


Basic Information

Item Value
gene id G274344
gene name LOC106586294
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 54679918 ~ 54682805 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU311493
TCGAATGGTTGTGATTTTAACCGAGCTGAACCTCTGGTCTTCAAATAAACATGTGAAAACTCCACTATCCTCAAATGTCACTGGTGAGACATGCAGTGGGAAATCATATCCGTTGAATGAGGGAGATGAGAATCGGTCACTTCTGACTTTGTCTGATGAAGTCAGAGTAACAGATGTTGGTGATCTGCTCATGATCCATTTGGCTCTGCTGTATGAGGACCTTGACCTGCAGATCAACTTCACCTCACTGCTGTTGCTGCTCTCTCGAAACAGATGTATCAATGGGTTATTAAATGTGCCTGTTTGTACAGACAGTGTAGTATGAACTCTAAACAACAATTCTCCATTCAGTCTGAAATTGCAGTTAGATCTCCCCTGGTAATTCTGATCGACAGTGTGGATGATCATATGGGCCGTTTTGTTGTAGAACAGCGTGGTGTTAGATGTGGAATCTCCATGTCTTTCCCACTGCAGTGTGGCCCCATCTGGTATGTGGGACACCTCGCAACGCACACTCACATCAGAACCCAGATACACTTCATTACCTTTATAGTTTGATGTCGCTTTAACCACAAAACTAAACACCTCAAATCTCGCCAGAACTGCTGAAGCTGGTTTGGTTTGCATGAGCACAAACTCTCCAGCATTTTCATATTTTGTTAGCATAGACAGGTCATATCCTGTTCCTTGTGAGAAAGGAGCCTGTGTGTTCCATGAAGGATTTCTACTCATGGAGGAAGTGATTTGGGCTACTGAAGTGTTTGAGTGTCTGCCATCATGTGCGGTCCACATCCATTGGTGTGCTGTCCCTTTCAGAACTGCAGGGGGAACTTGGAGAGTGACTCTGTTATTGGTATTGGTCTCGGCAAGGAAAAATATCTTCGTTGACAATTGTTCAGCTGAGAGTCCCTGACCGGATCTAGATATCCACAGCAGAACCCACAACAACGTTACACCCATAGAGCCACTGTACTGCCCCATGTTGCTGtatgttactgttctgttcccgTATCTACTCAGTAGCCAACTCATATCATTACTGACATCTCTGATAAATAGGTTCAGGAAATGACTGAAGAAAAGAAGAAGTTCAAAAACTACAGATGTGATGCAATTTAAAATGAGTGCAAATCTgaggatgtacagtgccttgcgaaagtattcggcccccttgaactttgcgaccttttgccacatttcaggct

Function

NR:

description
uncharacterized protein LOC110520222 isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU311493 True 1205 TUCP 0.44 4 54679918 54682805

Neighbor

gene id symbol gene type direction distance location
LOC110520215 LOC106586297 coding downstream 20237 54646623 ~ 54659681 (-)
LOC110520214 LOC106586297 coding downstream 33576 54639230 ~ 54646342 (-)
LOC110520218 NA coding downstream 43440 54633738 ~ 54636478 (-)
LOC110520216 LOC106586300 coding downstream 55374 54617528 ~ 54624544 (-)
LOC110520213 ube2f coding downstream 85838 54504064 ~ 54594080 (-)
LOC110520226 LOC106582378 coding upstream 364713 55047518 ~ 55050859 (-)
LOC110520227 plekhm3 coding upstream 388988 55068639 ~ 55122013 (-)
idh1 LOC106586335 coding upstream 448589 55131394 ~ 55146388 (-)
armc8 armc8 coding upstream 674562 55357367 ~ 55371667 (-)
LOC110520232 LOC106586350 coding upstream 693110 55375915 ~ 55382161 (-)
G274339 LOC106586295 non-coding downstream 1806 54669362 ~ 54678112 (-)
G274412 NA non-coding downstream 72546 54607167 ~ 54607372 (-)
G274208 NA non-coding downstream 362132 54315329 ~ 54317786 (-)
G274198 NA non-coding downstream 390647 54281582 ~ 54289271 (-)
G274126 NA non-coding downstream 450741 54174850 ~ 54229177 (-)
G274531 NA non-coding upstream 126014 54808819 ~ 54809081 (-)
G274536 NA non-coding upstream 131497 54814302 ~ 54814543 (-)
G274538 NA non-coding upstream 136463 54819268 ~ 54819476 (-)
G274552 NA non-coding upstream 147800 54830605 ~ 54831374 (-)
G274564 NA non-coding upstream 158902 54841707 ~ 54841923 (-)
G272713 LOC106586324 other downstream 1428834 53249926 ~ 53251084 (-)
LOC110520182 NA other downstream 1971102 52693956 ~ 52708816 (-)
il1rl1 il1rl1 other downstream 3079688 51596933 ~ 51619476 (-)
fgf9 NA other downstream 3205779 51471899 ~ 51478510 (-)
LOC110520160 LOC106586095 other downstream 3550608 51126600 ~ 51130404 (-)
G275250 NA other upstream 727338 55410143 ~ 55411487 (-)
si:dkey-91i10.3 LOC106586420 other upstream 2587977 57270782 ~ 57297762 (-)
G277673 LOC106586423 other upstream 2720179 57402984 ~ 57403575 (-)
G277749 LOC106586429 other upstream 2901581 57584386 ~ 57589183 (-)

Expression


Co-expression Network