Gene
RNA
| Item | Value |
|---|---|
| gene id | G274552 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 54830605 ~ 54831374 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| TC1-like transposase |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU311711 | True | 770 | lncRNA | 0.50 | 1 | 54830605 | 54831374 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110520215 | LOC106586297 | coding | downstream | 170924 | 54646623 ~ 54659681 (-) |
| LOC110520214 | LOC106586297 | coding | downstream | 184263 | 54639230 ~ 54646342 (-) |
| LOC110520218 | NA | coding | downstream | 194127 | 54633738 ~ 54636478 (-) |
| LOC110520216 | LOC106586300 | coding | downstream | 206061 | 54617528 ~ 54624544 (-) |
| LOC110520213 | ube2f | coding | downstream | 236525 | 54504064 ~ 54594080 (-) |
| LOC110520226 | LOC106582378 | coding | upstream | 216144 | 55047518 ~ 55050859 (-) |
| LOC110520227 | plekhm3 | coding | upstream | 240419 | 55068639 ~ 55122013 (-) |
| idh1 | LOC106586335 | coding | upstream | 300020 | 55131394 ~ 55146388 (-) |
| armc8 | armc8 | coding | upstream | 525993 | 55357367 ~ 55371667 (-) |
| LOC110520232 | LOC106586350 | coding | upstream | 544541 | 55375915 ~ 55382161 (-) |
| G274538 | NA | non-coding | downstream | 11129 | 54819268 ~ 54819476 (-) |
| G274536 | NA | non-coding | downstream | 16062 | 54814302 ~ 54814543 (-) |
| G274531 | NA | non-coding | downstream | 21524 | 54808819 ~ 54809081 (-) |
| G274339 | LOC106586295 | non-coding | downstream | 152493 | 54669362 ~ 54678112 (-) |
| G274412 | NA | non-coding | downstream | 223233 | 54607167 ~ 54607372 (-) |
| G274564 | NA | non-coding | upstream | 10333 | 54841707 ~ 54841923 (-) |
| G274950 | NA | non-coding | upstream | 28173 | 54859547 ~ 54860029 (-) |
| G274953 | NA | non-coding | upstream | 32891 | 54864265 ~ 54864533 (-) |
| G274959 | NA | non-coding | upstream | 51507 | 54882881 ~ 54883112 (-) |
| G274962 | NA | non-coding | upstream | 55527 | 54886901 ~ 54887168 (-) |
| G274344 | LOC106586294 | other | downstream | 147800 | 54679918 ~ 54682805 (-) |
| G272713 | LOC106586324 | other | downstream | 1579521 | 53249926 ~ 53251084 (-) |
| LOC110520182 | NA | other | downstream | 2121789 | 52693956 ~ 52708816 (-) |
| il1rl1 | il1rl1 | other | downstream | 3230375 | 51596933 ~ 51619476 (-) |
| fgf9 | NA | other | downstream | 3356466 | 51471899 ~ 51478510 (-) |
| G275250 | NA | other | upstream | 578769 | 55410143 ~ 55411487 (-) |
| si:dkey-91i10.3 | LOC106586420 | other | upstream | 2439408 | 57270782 ~ 57297762 (-) |
| G277673 | LOC106586423 | other | upstream | 2571610 | 57402984 ~ 57403575 (-) |
| G277749 | LOC106586429 | other | upstream | 2753012 | 57584386 ~ 57589183 (-) |
