G274588


Basic Information

Item Value
gene id G274588
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 54871226 ~ 54871482 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU311747
gctctcaagagaagacaggctatgtgcccacaaaatgaggtggaaactgagctgcacttcctaacctcatgccaaatgtatgaccatattagagacacatatttccctcagattacacagatccacaaagaatttgaaaacaaacccaattttgataaactcacatatctactgggtgaaataccacagtgtgccatcacagcagcaagatgtgtgacctgttgccacaagaaaagaacaaacaccactgtaaatac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU311747 True 257 lncRNA 0.41 1 54871226 54871482

Neighbor

gene id symbol gene type direction distance location
LOC110520222 LOC106586294 coding upstream 181728 54673232 ~ 54689498 (+)
LOC110520220 LOC106586295 coding upstream 198827 54668850 ~ 54672399 (+)
LOC110520210 LOC106586303 coding upstream 433865 54365929 ~ 54437361 (+)
LOC110520209 e41l5 coding upstream 505829 54318683 ~ 54365397 (+)
LOC110520208 LOC106586301 coding upstream 553397 54208875 ~ 54317829 (+)
creb1b creb1 coding downstream 121962 54993444 ~ 55001733 (+)
LOC110520225 LOC106586338 coding downstream 150248 55021730 ~ 55045043 (+)
kcnh3 LOC103481844 coding downstream 285961 55157443 ~ 55355650 (+)
LOC110520231 dbr1 coding downstream 500277 55371759 ~ 55375526 (+)
lcmt2 NA coding downstream 509189 55380671 ~ 55388722 (+)
G274583 NA non-coding upstream 6083 54864597 ~ 54865143 (+)
G274525 NA non-coding upstream 73731 54797278 ~ 54797495 (+)
G274459 NA non-coding upstream 82899 54734298 ~ 54788327 (+)
G274458 NA non-coding upstream 137542 54733369 ~ 54733684 (+)
G274449 NA non-coding upstream 144216 54726797 ~ 54727010 (+)
G274592 NA non-coding downstream 3083 54874399 ~ 54875115 (+)
G274594 NA non-coding downstream 12316 54883798 ~ 54884380 (+)
G274608 NA non-coding downstream 30734 54902216 ~ 54902689 (+)
G274714 NA non-coding downstream 245766 55117248 ~ 55117567 (+)
G273094 LOC106586310 other upstream 1029609 53841264 ~ 53841617 (+)
G273004 LOC106586313 other upstream 1212543 53657461 ~ 53658683 (+)
G272965 NA other upstream 1218795 53648825 ~ 53652431 (+)
LOC110520190 LOC106586322 other upstream 1534700 53291284 ~ 53339392 (+)
LOC110520187 LOC106586325 other upstream 1647961 53174264 ~ 53235027 (+)
G275542 LOC106586374 other downstream 1028712 55900194 ~ 55900743 (+)
G275553 LOC107595854 other downstream 1043847 55915329 ~ 55916133 (+)
G277296 NA other downstream 2393085 57264567 ~ 57264892 (+)

Expression


Co-expression Network