Gene
RNA
| Item | Value |
|---|---|
| gene id | G274592 |
| gene name | NA |
| gene type | misc |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 54874399 ~ 54875115 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU311754 | False | 593 | TUCP | 0.46 | 2 | 54874399 | 54875115 |
| TU311755 | True | 393 | lncRNA | 0.47 | 2 | 54874565 | 54875115 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110520222 | LOC106586294 | coding | upstream | 185067 | 54673232 ~ 54689498 (+) |
| LOC110520220 | LOC106586295 | coding | upstream | 202166 | 54668850 ~ 54672399 (+) |
| LOC110520210 | LOC106586303 | coding | upstream | 437204 | 54365929 ~ 54437361 (+) |
| LOC110520209 | e41l5 | coding | upstream | 509168 | 54318683 ~ 54365397 (+) |
| LOC110520208 | LOC106586301 | coding | upstream | 556736 | 54208875 ~ 54317829 (+) |
| creb1b | creb1 | coding | downstream | 118329 | 54993444 ~ 55001733 (+) |
| LOC110520225 | LOC106586338 | coding | downstream | 146615 | 55021730 ~ 55045043 (+) |
| kcnh3 | LOC103481844 | coding | downstream | 282328 | 55157443 ~ 55355650 (+) |
| LOC110520231 | dbr1 | coding | downstream | 496644 | 55371759 ~ 55375526 (+) |
| lcmt2 | NA | coding | downstream | 505556 | 55380671 ~ 55388722 (+) |
| G274588 | NA | non-coding | upstream | 3083 | 54871226 ~ 54871482 (+) |
| G274583 | NA | non-coding | upstream | 9422 | 54864597 ~ 54865143 (+) |
| G274525 | NA | non-coding | upstream | 77070 | 54797278 ~ 54797495 (+) |
| G274459 | NA | non-coding | upstream | 86238 | 54734298 ~ 54788327 (+) |
| G274458 | NA | non-coding | upstream | 140881 | 54733369 ~ 54733684 (+) |
| G274594 | NA | non-coding | downstream | 8683 | 54883798 ~ 54884380 (+) |
| G274608 | NA | non-coding | downstream | 27101 | 54902216 ~ 54902689 (+) |
| G274714 | NA | non-coding | downstream | 242133 | 55117248 ~ 55117567 (+) |
| G274715 | NA | non-coding | downstream | 244194 | 55119309 ~ 55119856 (+) |
| G273094 | LOC106586310 | other | upstream | 1032948 | 53841264 ~ 53841617 (+) |
| G273004 | LOC106586313 | other | upstream | 1215882 | 53657461 ~ 53658683 (+) |
| G272965 | NA | other | upstream | 1222134 | 53648825 ~ 53652431 (+) |
| LOC110520190 | LOC106586322 | other | upstream | 1538039 | 53291284 ~ 53339392 (+) |
| LOC110520187 | LOC106586325 | other | upstream | 1651300 | 53174264 ~ 53235027 (+) |
| G275542 | LOC106586374 | other | downstream | 1025079 | 55900194 ~ 55900743 (+) |
| G275553 | LOC107595854 | other | downstream | 1040214 | 55915329 ~ 55916133 (+) |
| G277296 | NA | other | downstream | 2389452 | 57264567 ~ 57264892 (+) |
| G277973 | NA | other | downstream | 2914619 | 57789734 ~ 57790332 (+) |
