G275020


Basic Information

Item Value
gene id G275020
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 55000183 ~ 55002557 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU312242
CATGGCCCCAGAAAACGtgcttttattattttttatttttttaGTATTTTTCTCCGCTCATACAGGGGTAATAAAGGCCTAGTGCACCAATTTGGTTTATTCAAAGGCCTAGTGCACTAATTTGGTTTACTGTGATTTATCAGGGGGTgatgcagcaccctcagcacccttaCTTCCCGCGGCTACGGATATTACCACCCATGGATGCAAATATTGAGGCGCCTTAGTCTAATGCTTACCCACTAAATCAAAGATTTGGCACATCATTAAGCACGTTAggctacacatcatgaaatatattgagacaaattacaaacagtagcctacaagtagcaacatagaactcaattgattgaacatggtATGTATTTCAATAGGACTGAAATAGGCCTACATCCTACTGTTTATATCttaatgcagtcatctcggttttcatttgaagcatatTTTTATACGTTGCTTGTTTGTATCAATTACAAAGACATTAGCACCTTTGCATTTGTAGTCAACATTGTTCTGAAGTTATCGGCGGACACAGAGAGACGGATAAAACCATGTGATGTTTAGCGGAGATCTTCTGTACATAAAGGAGGGCAAAAAAGCATCTAACGACGCACTgctgttctacgagtggtctgaAGCATGCGTTAGATTACGAGCGCTTTCAAGTGCAACGTTAATAACGAGATTTAACGAGGCTCCTACAAAAgttctaacgatgaacttagccttcagatgcttttgggaaaccgggcccagggaAATCTACAATGTCTTAACTGACTCCAATGCCAGGGTTCTGGAGGCTACCTTGACTTCCTTGTCTTGACTTCCTCTTGAGCTGATTGGACATTCAGACACTAACCCTATGGTTTGATTGGCTAACCATTGTTAGTGAAGAGATAAGAGGCTTTGGGTTAATAAAAAATGACTATGTCAGAAGTCTGTGACTTCTCTTCCCAGTATTCAAACCCCAAACAAGAAGCTTGAATAGTGTAAAAGAGTTAGTGTTATGTTTCACCACGTTATCCCTGGAACCACAACTGACGAATGAATCCTCATCCTTTCAGTTCCGCGGTGGGATAATATTGAGAGAAGTTGGGAGAGGCAAAGAAAGATGAAAAGGTGGATAACAAGTGAGCGGGAGAAGAAGGAGTGGAAGCAAGAGGAtgtgagagagaagacagggtgaAAATGGATTGGTGGATGGGAGATTGGGGGACGTATGGGCCAAAGTGGTCATGTTTACTACAGTTCCCACAAAGCACTGTCCATCACTGATCTCCCGTCCATCAATCCATTTTcattctgtcttctctctcacaTCCTCTTGCTTCAGATGTCATGGGTCATGCCCGTAGGCCAATGCTTGGCAGAGTCTCTGTACAGGTCAGTGGGCAGTCTGATGCCCGCTGAATAGGGAGTGACAGTTGGGCTAGGATGGGTTATTTTGAAGCTACTCAGATTTATGGCAGTACAGGTCTTTAAGTGCTTTCAGTTCCTCTATGAGGGTTTTGTTCTGGTTTTCCAGCACGGCCACGCGGTTCTCAAGACACTTGACATACTCCTTCTTCTTCCTGCGACACTCGCGGGC

Function

NR:

description
PREDICTED: cyclic AMP-responsive element-binding protein 1 isoform X3

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU312242 True 1594 lncRNA 0.43 2 55000183 55002557

Neighbor

gene id symbol gene type direction distance location
LOC110520215 LOC106586297 coding downstream 340502 54646623 ~ 54659681 (-)
LOC110520214 LOC106586297 coding downstream 353841 54639230 ~ 54646342 (-)
LOC110520218 NA coding downstream 363705 54633738 ~ 54636478 (-)
LOC110520216 LOC106586300 coding downstream 375639 54617528 ~ 54624544 (-)
LOC110520213 ube2f coding downstream 406103 54504064 ~ 54594080 (-)
LOC110520226 LOC106582378 coding upstream 44961 55047518 ~ 55050859 (-)
LOC110520227 plekhm3 coding upstream 69236 55068639 ~ 55122013 (-)
idh1 LOC106586335 coding upstream 128837 55131394 ~ 55146388 (-)
armc8 armc8 coding upstream 354810 55357367 ~ 55371667 (-)
LOC110520232 LOC106586350 coding upstream 373358 55375915 ~ 55382161 (-)
G274996 NA non-coding downstream 66383 54929696 ~ 54933800 (-)
G274971 NA non-coding downstream 103850 54895770 ~ 54896333 (-)
G274970 NA non-coding downstream 104632 54895258 ~ 54895551 (-)
G274962 NA non-coding downstream 113015 54886901 ~ 54887168 (-)
G274959 NA non-coding downstream 117071 54882881 ~ 54883112 (-)
G275045 NA non-coding upstream 32040 55034597 ~ 55109651 (-)
G275151 NA non-coding upstream 237162 55239719 ~ 55244575 (-)
G275196 NA non-coding upstream 310454 55313011 ~ 55313235 (-)
G275200 NA non-coding upstream 319846 55322403 ~ 55322661 (-)
G274344 LOC106586294 other downstream 317378 54679918 ~ 54682805 (-)
G272713 LOC106586324 other downstream 1749099 53249926 ~ 53251084 (-)
LOC110520182 NA other downstream 2291367 52693956 ~ 52708816 (-)
il1rl1 il1rl1 other downstream 3399953 51596933 ~ 51619476 (-)
fgf9 NA other downstream 3526044 51471899 ~ 51478510 (-)
G275250 NA other upstream 407586 55410143 ~ 55411487 (-)
si:dkey-91i10.3 LOC106586420 other upstream 2268225 57270782 ~ 57297762 (-)
G277673 LOC106586423 other upstream 2400427 57402984 ~ 57403575 (-)
G277749 LOC106586429 other upstream 2581829 57584386 ~ 57589183 (-)

Expression


Co-expression Network