Gene
RNA
| Item | Value |
|---|---|
| gene id | G275020 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 55000183 ~ 55002557 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: cyclic AMP-responsive element-binding protein 1 isoform X3 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU312242 | True | 1594 | lncRNA | 0.43 | 2 | 55000183 | 55002557 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110520215 | LOC106586297 | coding | downstream | 340502 | 54646623 ~ 54659681 (-) |
| LOC110520214 | LOC106586297 | coding | downstream | 353841 | 54639230 ~ 54646342 (-) |
| LOC110520218 | NA | coding | downstream | 363705 | 54633738 ~ 54636478 (-) |
| LOC110520216 | LOC106586300 | coding | downstream | 375639 | 54617528 ~ 54624544 (-) |
| LOC110520213 | ube2f | coding | downstream | 406103 | 54504064 ~ 54594080 (-) |
| LOC110520226 | LOC106582378 | coding | upstream | 44961 | 55047518 ~ 55050859 (-) |
| LOC110520227 | plekhm3 | coding | upstream | 69236 | 55068639 ~ 55122013 (-) |
| idh1 | LOC106586335 | coding | upstream | 128837 | 55131394 ~ 55146388 (-) |
| armc8 | armc8 | coding | upstream | 354810 | 55357367 ~ 55371667 (-) |
| LOC110520232 | LOC106586350 | coding | upstream | 373358 | 55375915 ~ 55382161 (-) |
| G274996 | NA | non-coding | downstream | 66383 | 54929696 ~ 54933800 (-) |
| G274971 | NA | non-coding | downstream | 103850 | 54895770 ~ 54896333 (-) |
| G274970 | NA | non-coding | downstream | 104632 | 54895258 ~ 54895551 (-) |
| G274962 | NA | non-coding | downstream | 113015 | 54886901 ~ 54887168 (-) |
| G274959 | NA | non-coding | downstream | 117071 | 54882881 ~ 54883112 (-) |
| G275045 | NA | non-coding | upstream | 32040 | 55034597 ~ 55109651 (-) |
| G275151 | NA | non-coding | upstream | 237162 | 55239719 ~ 55244575 (-) |
| G275196 | NA | non-coding | upstream | 310454 | 55313011 ~ 55313235 (-) |
| G275200 | NA | non-coding | upstream | 319846 | 55322403 ~ 55322661 (-) |
| G274344 | LOC106586294 | other | downstream | 317378 | 54679918 ~ 54682805 (-) |
| G272713 | LOC106586324 | other | downstream | 1749099 | 53249926 ~ 53251084 (-) |
| LOC110520182 | NA | other | downstream | 2291367 | 52693956 ~ 52708816 (-) |
| il1rl1 | il1rl1 | other | downstream | 3399953 | 51596933 ~ 51619476 (-) |
| fgf9 | NA | other | downstream | 3526044 | 51471899 ~ 51478510 (-) |
| G275250 | NA | other | upstream | 407586 | 55410143 ~ 55411487 (-) |
| si:dkey-91i10.3 | LOC106586420 | other | upstream | 2268225 | 57270782 ~ 57297762 (-) |
| G277673 | LOC106586423 | other | upstream | 2400427 | 57402984 ~ 57403575 (-) |
| G277749 | LOC106586429 | other | upstream | 2581829 | 57584386 ~ 57589183 (-) |
