Gene
RNA
| Item | Value |
|---|---|
| gene id | G274715 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 55119309 ~ 55119856 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU311896 | True | 548 | lncRNA | 0.53 | 1 | 55119309 | 55119856 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110520225 | LOC106586338 | coding | upstream | 74266 | 55021730 ~ 55045043 (+) |
| creb1b | creb1 | coding | upstream | 117576 | 54993444 ~ 55001733 (+) |
| LOC110520223 | klf7 | coding | upstream | 187766 | 54859520 ~ 54931543 (+) |
| LOC110520222 | LOC106586294 | coding | upstream | 429811 | 54673232 ~ 54689498 (+) |
| LOC110520220 | LOC106586295 | coding | upstream | 446910 | 54668850 ~ 54672399 (+) |
| kcnh3 | LOC103481844 | coding | downstream | 37587 | 55157443 ~ 55355650 (+) |
| LOC110520231 | dbr1 | coding | downstream | 251903 | 55371759 ~ 55375526 (+) |
| lcmt2 | NA | coding | downstream | 260815 | 55380671 ~ 55388722 (+) |
| LOC110520234 | LOC106586346 | coding | downstream | 286015 | 55405871 ~ 55411555 (+) |
| LOC110504295 | LOC106586344 | coding | downstream | 310337 | 55430193 ~ 55496588 (+) |
| G274714 | NA | non-coding | upstream | 1742 | 55117248 ~ 55117567 (+) |
| G274608 | NA | non-coding | upstream | 216620 | 54902216 ~ 54902689 (+) |
| G274594 | NA | non-coding | upstream | 234929 | 54883798 ~ 54884380 (+) |
| G274592 | NA | non-coding | upstream | 244194 | 54874399 ~ 54875115 (+) |
| G274720 | NA | non-coding | downstream | 6345 | 55126201 ~ 55126515 (+) |
| G274723 | LOC106582376 | non-coding | downstream | 15595 | 55135451 ~ 55146403 (+) |
| G274809 | NA | non-coding | downstream | 140380 | 55260236 ~ 55261218 (+) |
| G274843 | NA | non-coding | downstream | 194554 | 55314410 ~ 55314616 (+) |
| G274845 | NA | non-coding | downstream | 196125 | 55315981 ~ 55316196 (+) |
| G273094 | LOC106586310 | other | upstream | 1277692 | 53841264 ~ 53841617 (+) |
| G273004 | LOC106586313 | other | upstream | 1460626 | 53657461 ~ 53658683 (+) |
| G272965 | NA | other | upstream | 1466878 | 53648825 ~ 53652431 (+) |
| LOC110520190 | LOC106586322 | other | upstream | 1782783 | 53291284 ~ 53339392 (+) |
| G275542 | LOC106586374 | other | downstream | 780338 | 55900194 ~ 55900743 (+) |
| G275553 | LOC107595854 | other | downstream | 795473 | 55915329 ~ 55916133 (+) |
| G277296 | NA | other | downstream | 2144711 | 57264567 ~ 57264892 (+) |
| G277973 | NA | other | downstream | 2669878 | 57789734 ~ 57790332 (+) |
