Gene
RNA
| Item | Value |
|---|---|
| gene id | G274723 |
| gene name | LOC106582376 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 55135451 ~ 55146403 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: isocitrate dehydrogenase [NADP] cytoplasmic-like isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU311905 | True | 903 | lncRNA | 0.50 | 3 | 55135451 | 55146403 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110520225 | LOC106586338 | coding | upstream | 90408 | 55021730 ~ 55045043 (+) |
| creb1b | creb1 | coding | upstream | 133718 | 54993444 ~ 55001733 (+) |
| LOC110520223 | klf7 | coding | upstream | 203908 | 54859520 ~ 54931543 (+) |
| LOC110520222 | LOC106586294 | coding | upstream | 445953 | 54673232 ~ 54689498 (+) |
| LOC110520220 | LOC106586295 | coding | upstream | 463052 | 54668850 ~ 54672399 (+) |
| kcnh3 | LOC103481844 | coding | downstream | 11040 | 55157443 ~ 55355650 (+) |
| LOC110520231 | dbr1 | coding | downstream | 225356 | 55371759 ~ 55375526 (+) |
| lcmt2 | NA | coding | downstream | 234268 | 55380671 ~ 55388722 (+) |
| LOC110520234 | LOC106586346 | coding | downstream | 259468 | 55405871 ~ 55411555 (+) |
| LOC110504295 | LOC106586344 | coding | downstream | 283790 | 55430193 ~ 55496588 (+) |
| G274720 | NA | non-coding | upstream | 8936 | 55126201 ~ 55126515 (+) |
| G274715 | NA | non-coding | upstream | 15595 | 55119309 ~ 55119856 (+) |
| G274714 | NA | non-coding | upstream | 17884 | 55117248 ~ 55117567 (+) |
| G274608 | NA | non-coding | upstream | 232762 | 54902216 ~ 54902689 (+) |
| G274809 | NA | non-coding | downstream | 113833 | 55260236 ~ 55261218 (+) |
| G274843 | NA | non-coding | downstream | 168007 | 55314410 ~ 55314616 (+) |
| G274845 | NA | non-coding | downstream | 169578 | 55315981 ~ 55316196 (+) |
| G274846 | NA | non-coding | downstream | 170277 | 55316680 ~ 55316889 (+) |
| G274847 | NA | non-coding | downstream | 173916 | 55320319 ~ 55320522 (+) |
| G274592 | NA | other | upstream | 260336 | 54874399 ~ 54875115 (+) |
| G273094 | LOC106586310 | other | upstream | 1293834 | 53841264 ~ 53841617 (+) |
| G273004 | LOC106586313 | other | upstream | 1476768 | 53657461 ~ 53658683 (+) |
| G272965 | NA | other | upstream | 1483020 | 53648825 ~ 53652431 (+) |
| LOC110520190 | LOC106586322 | other | upstream | 1798925 | 53291284 ~ 53339392 (+) |
| G275542 | LOC106586374 | other | downstream | 753791 | 55900194 ~ 55900743 (+) |
| G275553 | LOC107595854 | other | downstream | 768926 | 55915329 ~ 55916133 (+) |
| G277296 | NA | other | downstream | 2118164 | 57264567 ~ 57264892 (+) |
| G277973 | NA | other | downstream | 2643331 | 57789734 ~ 57790332 (+) |
