G274809


Basic Information

Item Value
gene id G274809
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 55260236 ~ 55261218 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU311996
cctgctcatCAATCGTTGATATGGTTAAACCTTCTCCTACATTCTGTCCGCCGTCTGGTGGATGGCATGTCAATTCAGGCTGGTGGAAATGAGATATCCCACTTGTCACAGCTCTTCTTATTGACCTGcgctcaggaaggagacacgtctTCCaggtgtgttacagggaagacatcctcctccctcatgtggttcccgtcctgcaggctcatcctgacatgaccctccagcatgacaatgccaccagccatgctgctcgttctgtgtgtgatttcctgcaagacaggaatgtcag

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU311996 True 295 lncRNA 0.52 2 55260236 55261218

Neighbor

gene id symbol gene type direction distance location
LOC110520225 LOC106586338 coding upstream 215193 55021730 ~ 55045043 (+)
creb1b creb1 coding upstream 258503 54993444 ~ 55001733 (+)
LOC110520223 klf7 coding upstream 328693 54859520 ~ 54931543 (+)
LOC110520222 LOC106586294 coding upstream 570738 54673232 ~ 54689498 (+)
LOC110520220 LOC106586295 coding upstream 587837 54668850 ~ 54672399 (+)
LOC110520231 dbr1 coding downstream 110541 55371759 ~ 55375526 (+)
lcmt2 NA coding downstream 119453 55380671 ~ 55388722 (+)
LOC110520234 LOC106586346 coding downstream 144653 55405871 ~ 55411555 (+)
LOC110504295 LOC106586344 coding downstream 168975 55430193 ~ 55496588 (+)
rftn2 rftn2 coding downstream 480479 55741697 ~ 55779314 (+)
G274723 LOC106582376 non-coding upstream 113833 55135451 ~ 55146403 (+)
G274720 NA non-coding upstream 133721 55126201 ~ 55126515 (+)
G274715 NA non-coding upstream 140380 55119309 ~ 55119856 (+)
G274714 NA non-coding upstream 142669 55117248 ~ 55117567 (+)
G274843 NA non-coding downstream 53192 55314410 ~ 55314616 (+)
G274845 NA non-coding downstream 54763 55315981 ~ 55316196 (+)
G274846 NA non-coding downstream 55462 55316680 ~ 55316889 (+)
G274847 NA non-coding downstream 59101 55320319 ~ 55320522 (+)
G274850 NA non-coding downstream 61531 55322749 ~ 55323075 (+)
G274592 NA other upstream 385121 54874399 ~ 54875115 (+)
G273094 LOC106586310 other upstream 1418619 53841264 ~ 53841617 (+)
G273004 LOC106586313 other upstream 1601553 53657461 ~ 53658683 (+)
G272965 NA other upstream 1607805 53648825 ~ 53652431 (+)
LOC110520190 LOC106586322 other upstream 1923710 53291284 ~ 53339392 (+)
G275542 LOC106586374 other downstream 638976 55900194 ~ 55900743 (+)
G275553 LOC107595854 other downstream 654111 55915329 ~ 55916133 (+)
G277296 NA other downstream 2003349 57264567 ~ 57264892 (+)
G277973 NA other downstream 2528516 57789734 ~ 57790332 (+)

Expression


Co-expression Network