G274845



Basic Information


Item Value
gene id G274845
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 55315981 ~ 55316196 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU312034
CAGGATACAGGAAGACCCGGAGCACAGGAGAAGATATCCCGGAGAGGGTCTCATGGGGGAGACCTGTTCTTTTCTTTTTGATTTATTCTttaataaacacccttgaaactgagctaatcatactctgtccgtgtctgatctatgtaaacgtcttgaccaaaccccctggtctgccacaagtGGTGGAGAATGCGGGCACTCTGATAACGTGGTCAG

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU312034 True 216 lncRNA 0.48 1 55315981 55316196

Neighbor


gene id symbol gene type direction distance location
LOC110520225 LOC106586338 coding upstream 270938 55021730 ~ 55045043 (+)
creb1b creb1 coding upstream 314248 54993444 ~ 55001733 (+)
LOC110520223 klf7 coding upstream 384438 54859520 ~ 54931543 (+)
LOC110520222 LOC106586294 coding upstream 626483 54673232 ~ 54689498 (+)
LOC110520220 LOC106586295 coding upstream 643582 54668850 ~ 54672399 (+)
LOC110520231 dbr1 coding downstream 55563 55371759 ~ 55375526 (+)
lcmt2 NA coding downstream 64475 55380671 ~ 55388722 (+)
LOC110520234 LOC106586346 coding downstream 89675 55405871 ~ 55411555 (+)
LOC110504295 LOC106586344 coding downstream 113997 55430193 ~ 55496588 (+)
rftn2 rftn2 coding downstream 425501 55741697 ~ 55779314 (+)
G274843 NA non-coding upstream 1365 55314410 ~ 55314616 (+)
G274809 NA non-coding upstream 54763 55260236 ~ 55261218 (+)
G274723 LOC106582376 non-coding upstream 169578 55135451 ~ 55146403 (+)
G274720 NA non-coding upstream 189466 55126201 ~ 55126515 (+)
G274715 NA non-coding upstream 196125 55119309 ~ 55119856 (+)
G274846 NA non-coding downstream 484 55316680 ~ 55316889 (+)
G274847 NA non-coding downstream 4123 55320319 ~ 55320522 (+)
G274850 NA non-coding downstream 6553 55322749 ~ 55323075 (+)
G274862 NA non-coding downstream 25874 55342070 ~ 55342274 (+)
G274864 NA non-coding downstream 30814 55347010 ~ 55347247 (+)
G274592 NA other upstream 440866 54874399 ~ 54875115 (+)
G273094 LOC106586310 other upstream 1474364 53841264 ~ 53841617 (+)
G273004 LOC106586313 other upstream 1657298 53657461 ~ 53658683 (+)
G272965 NA other upstream 1663550 53648825 ~ 53652431 (+)
LOC110520190 LOC106586322 other upstream 1979455 53291284 ~ 53339392 (+)
G275542 LOC106586374 other downstream 583998 55900194 ~ 55900743 (+)
G275553 LOC107595854 other downstream 599133 55915329 ~ 55916133 (+)
G277296 NA other downstream 1948371 57264567 ~ 57264892 (+)
G277973 NA other downstream 2473538 57789734 ~ 57790332 (+)

Expression



Co-expression Network