G274846


Basic Information

Item Value
gene id G274846
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 55316680 ~ 55316889 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU312035
GCGCATCACCAGAGCATGGCTCCTCACCGACGTATCCACCCTCTCCATCCTCAACAAAGTGGTCCTGGATCGCTTCTTACAGGCGCTACCCCATGACATGAAGAGGGCAGCGAGTTTATGTGGACCCCAGACCTTGGAGGGCCTCCTGGAAGCAGTGGAGACGCAGAACACTTAGGCACTGCTGACTGGGAGCCGGGATGGAAGGACAGC

Function

NR:

description
PREDICTED: sacsin-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU312035 True 210 lncRNA 0.59 1 55316680 55316889

Neighbor

gene id symbol gene type direction distance location
LOC110520225 LOC106586338 coding upstream 271637 55021730 ~ 55045043 (+)
creb1b creb1 coding upstream 314947 54993444 ~ 55001733 (+)
LOC110520223 klf7 coding upstream 385137 54859520 ~ 54931543 (+)
LOC110520222 LOC106586294 coding upstream 627182 54673232 ~ 54689498 (+)
LOC110520220 LOC106586295 coding upstream 644281 54668850 ~ 54672399 (+)
LOC110520231 dbr1 coding downstream 54870 55371759 ~ 55375526 (+)
lcmt2 NA coding downstream 63782 55380671 ~ 55388722 (+)
LOC110520234 LOC106586346 coding downstream 88982 55405871 ~ 55411555 (+)
LOC110504295 LOC106586344 coding downstream 113304 55430193 ~ 55496588 (+)
rftn2 rftn2 coding downstream 424808 55741697 ~ 55779314 (+)
G274845 NA non-coding upstream 484 55315981 ~ 55316196 (+)
G274843 NA non-coding upstream 2064 55314410 ~ 55314616 (+)
G274809 NA non-coding upstream 55462 55260236 ~ 55261218 (+)
G274723 LOC106582376 non-coding upstream 170277 55135451 ~ 55146403 (+)
G274720 NA non-coding upstream 190165 55126201 ~ 55126515 (+)
G274847 NA non-coding downstream 3430 55320319 ~ 55320522 (+)
G274850 NA non-coding downstream 5860 55322749 ~ 55323075 (+)
G274862 NA non-coding downstream 25181 55342070 ~ 55342274 (+)
G274864 NA non-coding downstream 30121 55347010 ~ 55347247 (+)
G274865 NA non-coding downstream 30996 55347885 ~ 55348141 (+)
G274592 NA other upstream 441565 54874399 ~ 54875115 (+)
G273094 LOC106586310 other upstream 1475063 53841264 ~ 53841617 (+)
G273004 LOC106586313 other upstream 1657997 53657461 ~ 53658683 (+)
G272965 NA other upstream 1664249 53648825 ~ 53652431 (+)
LOC110520190 LOC106586322 other upstream 1980154 53291284 ~ 53339392 (+)
G275542 LOC106586374 other downstream 583305 55900194 ~ 55900743 (+)
G275553 LOC107595854 other downstream 598440 55915329 ~ 55916133 (+)
G277296 NA other downstream 1947678 57264567 ~ 57264892 (+)
G277973 NA other downstream 2472845 57789734 ~ 57790332 (+)

Expression


Co-expression Network