G274850


Basic Information

Item Value
gene id G274850
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 55322749 ~ 55323075 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU312039
attgatgaggtaaacaaaaacaatttcatacattttagaataagactgaacttaaacaaaatgtggaaaaagtcaagggttctgaatactttctgaatgcactgtacatatgtaCCTCCATTTATGTACCTCTCATTTCCTTGCACCTCAACTCGGTACTGTTACCCCGTGTATTTTGCCAAGCTATCATTGCTCATTTTGTATTTTGTCCTTGTGTTACCATTTTTTTtctattattataattttttataatTCTTTatttgcattgttgggaagggcccgtaaataagcatttcactgtcagtctccatctgttgtttacgaagc

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU312039 True 327 lncRNA 0.34 1 55322749 55323075

Neighbor

gene id symbol gene type direction distance location
LOC110520225 LOC106586338 coding upstream 277706 55021730 ~ 55045043 (+)
creb1b creb1 coding upstream 321016 54993444 ~ 55001733 (+)
LOC110520223 klf7 coding upstream 391206 54859520 ~ 54931543 (+)
LOC110520222 LOC106586294 coding upstream 633251 54673232 ~ 54689498 (+)
LOC110520220 LOC106586295 coding upstream 650350 54668850 ~ 54672399 (+)
LOC110520231 dbr1 coding downstream 48684 55371759 ~ 55375526 (+)
lcmt2 NA coding downstream 57596 55380671 ~ 55388722 (+)
LOC110520234 LOC106586346 coding downstream 82796 55405871 ~ 55411555 (+)
LOC110504295 LOC106586344 coding downstream 107118 55430193 ~ 55496588 (+)
rftn2 rftn2 coding downstream 418622 55741697 ~ 55779314 (+)
G274847 NA non-coding upstream 2227 55320319 ~ 55320522 (+)
G274846 NA non-coding upstream 5860 55316680 ~ 55316889 (+)
G274845 NA non-coding upstream 6553 55315981 ~ 55316196 (+)
G274843 NA non-coding upstream 8133 55314410 ~ 55314616 (+)
G274809 NA non-coding upstream 61531 55260236 ~ 55261218 (+)
G274862 NA non-coding downstream 18995 55342070 ~ 55342274 (+)
G274864 NA non-coding downstream 23935 55347010 ~ 55347247 (+)
G274865 NA non-coding downstream 24810 55347885 ~ 55348141 (+)
kcnh3 LOC103481844 non-coding downstream 30930 55157443 ~ 55355650 (+)
G274828 NA non-coding downstream 33707 55356782 ~ 55357693 (+)
G274592 NA other upstream 447634 54874399 ~ 54875115 (+)
G273094 LOC106586310 other upstream 1481132 53841264 ~ 53841617 (+)
G273004 LOC106586313 other upstream 1664066 53657461 ~ 53658683 (+)
G272965 NA other upstream 1670318 53648825 ~ 53652431 (+)
LOC110520190 LOC106586322 other upstream 1986223 53291284 ~ 53339392 (+)
G275542 LOC106586374 other downstream 577119 55900194 ~ 55900743 (+)
G275553 LOC107595854 other downstream 592254 55915329 ~ 55916133 (+)
G277296 NA other downstream 1941492 57264567 ~ 57264892 (+)
G277973 NA other downstream 2466659 57789734 ~ 57790332 (+)

Expression


Co-expression Network