G275206 (LOC106586333)



Basic Information


Item Value
gene id G275206
gene name LOC106586333
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 55329713 ~ 55329952 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU312451
CTAGTATAGCCAGCACAGTGTTGTCCTTCAGCACCTCCATGGACCCGGAGCAGACAAAGTAGATGGCCTGCAGAGCGTCTCCCTGGCGGATGAGGAACTCTCCCGGGGCGCAAAACGACGTCTTGATGATGAGGGACAGGGAGCGCAGACACCCCCTACTGGCCGACTCAAACAGCGGCAGCTGCAGCAGCTCCTTATTCAGGTGCATGGCGATGTCCGCCCTCAACTCATCTGGGAAGT

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU312451 True 240 lncRNA 0.59 1 55329713 55329952

Neighbor


gene id symbol gene type direction distance location
idh1 LOC106586335 coding downstream 183325 55131394 ~ 55146388 (-)
LOC110520227 plekhm3 coding downstream 207700 55068639 ~ 55122013 (-)
LOC110520226 LOC106582378 coding downstream 278854 55047518 ~ 55050859 (-)
LOC110520215 LOC106586297 coding downstream 670032 54646623 ~ 54659681 (-)
LOC110520214 LOC106586297 coding downstream 683371 54639230 ~ 54646342 (-)
armc8 armc8 coding upstream 27415 55357367 ~ 55371667 (-)
LOC110520232 LOC106586350 coding upstream 45963 55375915 ~ 55382161 (-)
crygs2 LOC106586348 coding upstream 59149 55389101 ~ 55391332 (-)
LOC110520233 NA coding upstream 62237 55392189 ~ 55395003 (-)
LOC110504309 plcl1 coding upstream 262412 55592364 ~ 55715785 (-)
G275205 NA non-coding downstream 772 55328742 ~ 55328941 (-)
G275201 NA non-coding downstream 6091 55323411 ~ 55323622 (-)
G275200 NA non-coding downstream 7052 55322403 ~ 55322661 (-)
G275196 NA non-coding downstream 16478 55313011 ~ 55313235 (-)
G275151 NA non-coding downstream 85138 55239719 ~ 55244575 (-)
G275211 NA non-coding upstream 3869 55333821 ~ 55334051 (-)
G275218 NA non-coding upstream 10714 55340666 ~ 55340993 (-)
G275219 NA non-coding upstream 11151 55341103 ~ 55341589 (-)
G275220 LOC103156743 non-coding upstream 14579 55344531 ~ 55344780 (-)
G275224 LOC106586341 non-coding upstream 21032 55350984 ~ 55351407 (-)
G274344 LOC106586294 other downstream 646908 54679918 ~ 54682805 (-)
G272713 LOC106586324 other downstream 2078629 53249926 ~ 53251084 (-)
LOC110520182 NA other downstream 2620897 52693956 ~ 52708816 (-)
il1rl1 il1rl1 other downstream 3729483 51596933 ~ 51619476 (-)
G275250 NA other upstream 80191 55410143 ~ 55411487 (-)
si:dkey-91i10.3 LOC106586420 other upstream 1940830 57270782 ~ 57297762 (-)
G277673 LOC106586423 other upstream 2073032 57402984 ~ 57403575 (-)
G277749 LOC106586429 other upstream 2254434 57584386 ~ 57589183 (-)
G284018 NA other upstream 7384623 62714575 ~ 62715177 (-)

Expression



Co-expression Network