Gene
RNA
| Item | Value |
|---|---|
| gene id | G274865 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 55347885 ~ 55348141 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU312054 | True | 257 | lncRNA | 0.52 | 1 | 55347885 | 55348141 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110520225 | LOC106586338 | coding | upstream | 302842 | 55021730 ~ 55045043 (+) |
| creb1b | creb1 | coding | upstream | 346152 | 54993444 ~ 55001733 (+) |
| LOC110520223 | klf7 | coding | upstream | 416342 | 54859520 ~ 54931543 (+) |
| LOC110520222 | LOC106586294 | coding | upstream | 658387 | 54673232 ~ 54689498 (+) |
| LOC110520220 | LOC106586295 | coding | upstream | 675486 | 54668850 ~ 54672399 (+) |
| LOC110520231 | dbr1 | coding | downstream | 23618 | 55371759 ~ 55375526 (+) |
| lcmt2 | NA | coding | downstream | 32530 | 55380671 ~ 55388722 (+) |
| LOC110520234 | LOC106586346 | coding | downstream | 57730 | 55405871 ~ 55411555 (+) |
| LOC110504295 | LOC106586344 | coding | downstream | 82052 | 55430193 ~ 55496588 (+) |
| rftn2 | rftn2 | coding | downstream | 393556 | 55741697 ~ 55779314 (+) |
| G274864 | NA | non-coding | upstream | 638 | 55347010 ~ 55347247 (+) |
| G274862 | NA | non-coding | upstream | 5611 | 55342070 ~ 55342274 (+) |
| G274850 | NA | non-coding | upstream | 24810 | 55322749 ~ 55323075 (+) |
| G274847 | NA | non-coding | upstream | 27363 | 55320319 ~ 55320522 (+) |
| G274846 | NA | non-coding | upstream | 30996 | 55316680 ~ 55316889 (+) |
| kcnh3 | LOC103481844 | non-coding | downstream | 5864 | 55157443 ~ 55355650 (+) |
| G274828 | NA | non-coding | downstream | 8641 | 55356782 ~ 55357693 (+) |
| G274876 | NA | non-coding | downstream | 27772 | 55375913 ~ 55378994 (+) |
| G274885 | NA | non-coding | downstream | 38891 | 55387032 ~ 55387567 (+) |
| G274592 | NA | other | upstream | 472770 | 54874399 ~ 54875115 (+) |
| G273094 | LOC106586310 | other | upstream | 1506268 | 53841264 ~ 53841617 (+) |
| G273004 | LOC106586313 | other | upstream | 1689202 | 53657461 ~ 53658683 (+) |
| G272965 | NA | other | upstream | 1695454 | 53648825 ~ 53652431 (+) |
| LOC110520190 | LOC106586322 | other | upstream | 2011359 | 53291284 ~ 53339392 (+) |
| G275542 | LOC106586374 | other | downstream | 552053 | 55900194 ~ 55900743 (+) |
| G275553 | LOC107595854 | other | downstream | 567188 | 55915329 ~ 55916133 (+) |
| G277296 | NA | other | downstream | 1916426 | 57264567 ~ 57264892 (+) |
| G277973 | NA | other | downstream | 2441593 | 57789734 ~ 57790332 (+) |
