Gene
RNA
| Item | Value |
|---|---|
| gene id | G275224 |
| gene name | LOC106586341 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 55350984 ~ 55351407 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| LOW QUALITY PROTEIN: potassium voltage-gated channel subfamily H member 8-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU312469 | True | 424 | lncRNA | 0.54 | 1 | 55350984 | 55351407 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| idh1 | LOC106586335 | coding | downstream | 204596 | 55131394 ~ 55146388 (-) |
| LOC110520227 | plekhm3 | coding | downstream | 228971 | 55068639 ~ 55122013 (-) |
| LOC110520226 | LOC106582378 | coding | downstream | 300125 | 55047518 ~ 55050859 (-) |
| LOC110520215 | LOC106586297 | coding | downstream | 691303 | 54646623 ~ 54659681 (-) |
| LOC110520214 | LOC106586297 | coding | downstream | 704642 | 54639230 ~ 54646342 (-) |
| armc8 | armc8 | coding | upstream | 5960 | 55357367 ~ 55371667 (-) |
| LOC110520232 | LOC106586350 | coding | upstream | 24508 | 55375915 ~ 55382161 (-) |
| crygs2 | LOC106586348 | coding | upstream | 37694 | 55389101 ~ 55391332 (-) |
| LOC110520233 | NA | coding | upstream | 40782 | 55392189 ~ 55395003 (-) |
| LOC110504309 | plcl1 | coding | upstream | 240957 | 55592364 ~ 55715785 (-) |
| G275220 | LOC103156743 | non-coding | downstream | 6204 | 55344531 ~ 55344780 (-) |
| G275219 | NA | non-coding | downstream | 9395 | 55341103 ~ 55341589 (-) |
| G275218 | NA | non-coding | downstream | 9991 | 55340666 ~ 55340993 (-) |
| G275211 | NA | non-coding | downstream | 16933 | 55333821 ~ 55334051 (-) |
| G275206 | LOC106586333 | non-coding | downstream | 21032 | 55329713 ~ 55329952 (-) |
| G275182 | NA | non-coding | upstream | 2608 | 55354015 ~ 55355591 (-) |
| G275183 | NA | non-coding | upstream | 4518 | 55355925 ~ 55356431 (-) |
| G275229 | NA | non-coding | upstream | 23693 | 55375100 ~ 55375519 (-) |
| G275234 | NA | non-coding | upstream | 35567 | 55386974 ~ 55387224 (-) |
| G274344 | LOC106586294 | other | downstream | 668179 | 54679918 ~ 54682805 (-) |
| G272713 | LOC106586324 | other | downstream | 2099900 | 53249926 ~ 53251084 (-) |
| LOC110520182 | NA | other | downstream | 2642168 | 52693956 ~ 52708816 (-) |
| il1rl1 | il1rl1 | other | downstream | 3750754 | 51596933 ~ 51619476 (-) |
| G275250 | NA | other | upstream | 58736 | 55410143 ~ 55411487 (-) |
| si:dkey-91i10.3 | LOC106586420 | other | upstream | 1919375 | 57270782 ~ 57297762 (-) |
| G277673 | LOC106586423 | other | upstream | 2051577 | 57402984 ~ 57403575 (-) |
| G277749 | LOC106586429 | other | upstream | 2232979 | 57584386 ~ 57589183 (-) |
| G284018 | NA | other | upstream | 7363168 | 62714575 ~ 62715177 (-) |
