Gene
RNA
| Item | Value |
|---|---|
| gene id | G275229 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 55375100 ~ 55375519 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: cysteine/serine-rich nuclear protein 3-like isoform X2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU312475 | True | 420 | lncRNA | 0.39 | 1 | 55375100 | 55375519 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| armc8 | armc8 | coding | downstream | 3433 | 55357367 ~ 55371667 (-) |
| idh1 | LOC106586335 | coding | downstream | 228712 | 55131394 ~ 55146388 (-) |
| LOC110520227 | plekhm3 | coding | downstream | 253087 | 55068639 ~ 55122013 (-) |
| LOC110520226 | LOC106582378 | coding | downstream | 324241 | 55047518 ~ 55050859 (-) |
| LOC110520215 | LOC106586297 | coding | downstream | 715419 | 54646623 ~ 54659681 (-) |
| LOC110520232 | LOC106586350 | coding | upstream | 396 | 55375915 ~ 55382161 (-) |
| crygs2 | LOC106586348 | coding | upstream | 13582 | 55389101 ~ 55391332 (-) |
| LOC110520233 | NA | coding | upstream | 16670 | 55392189 ~ 55395003 (-) |
| LOC110504309 | plcl1 | coding | upstream | 216845 | 55592364 ~ 55715785 (-) |
| LOC110520238 | LOC106586370 | coding | upstream | 403984 | 55779503 ~ 55821242 (-) |
| G275183 | NA | non-coding | downstream | 18669 | 55355925 ~ 55356431 (-) |
| G275182 | NA | non-coding | downstream | 19509 | 55354015 ~ 55355591 (-) |
| G275224 | LOC106586341 | non-coding | downstream | 23693 | 55350984 ~ 55351407 (-) |
| G275220 | LOC103156743 | non-coding | downstream | 30320 | 55344531 ~ 55344780 (-) |
| G275234 | NA | non-coding | upstream | 11455 | 55386974 ~ 55387224 (-) |
| G275243 | NA | non-coding | upstream | 22371 | 55397890 ~ 55398246 (-) |
| G275244 | NA | non-coding | upstream | 24284 | 55399803 ~ 55400473 (-) |
| G275248 | NA | non-coding | upstream | 28957 | 55404476 ~ 55404714 (-) |
| G274344 | LOC106586294 | other | downstream | 692295 | 54679918 ~ 54682805 (-) |
| G272713 | LOC106586324 | other | downstream | 2124016 | 53249926 ~ 53251084 (-) |
| LOC110520182 | NA | other | downstream | 2666284 | 52693956 ~ 52708816 (-) |
| il1rl1 | il1rl1 | other | downstream | 3774870 | 51596933 ~ 51619476 (-) |
| G275250 | NA | other | upstream | 34624 | 55410143 ~ 55411487 (-) |
| si:dkey-91i10.3 | LOC106586420 | other | upstream | 1895263 | 57270782 ~ 57297762 (-) |
| G277673 | LOC106586423 | other | upstream | 2027465 | 57402984 ~ 57403575 (-) |
| G277749 | LOC106586429 | other | upstream | 2208867 | 57584386 ~ 57589183 (-) |
| G284018 | NA | other | upstream | 7339056 | 62714575 ~ 62715177 (-) |
