Gene
RNA
| Item | Value |
|---|---|
| gene id | G275244 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 55399803 ~ 55400473 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| uncharacterized protein LOC110534718 isoform X2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU312491 | True | 671 | lncRNA | 0.45 | 1 | 55399803 | 55400473 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110520233 | NA | coding | downstream | 4800 | 55392189 ~ 55395003 (-) |
| crygs2 | LOC106586348 | coding | downstream | 8471 | 55389101 ~ 55391332 (-) |
| LOC110520232 | LOC106586350 | coding | downstream | 17642 | 55375915 ~ 55382161 (-) |
| armc8 | armc8 | coding | downstream | 28136 | 55357367 ~ 55371667 (-) |
| idh1 | LOC106586335 | coding | downstream | 253415 | 55131394 ~ 55146388 (-) |
| LOC110504309 | plcl1 | coding | upstream | 191891 | 55592364 ~ 55715785 (-) |
| LOC110520238 | LOC106586370 | coding | upstream | 379030 | 55779503 ~ 55821242 (-) |
| LOC110520241 | LOC106586374 | coding | upstream | 489909 | 55890382 ~ 55923883 (-) |
| LOC110520251 | LOC106586357 | coding | upstream | 583400 | 55983873 ~ 55985477 (-) |
| LOC110520250 | LOC106586358 | coding | upstream | 586630 | 55987103 ~ 55988048 (-) |
| G275243 | NA | non-coding | downstream | 1557 | 55397890 ~ 55398246 (-) |
| G275234 | NA | non-coding | downstream | 12579 | 55386974 ~ 55387224 (-) |
| G275229 | NA | non-coding | downstream | 24284 | 55375100 ~ 55375519 (-) |
| G275248 | NA | non-coding | upstream | 4003 | 55404476 ~ 55404714 (-) |
| G275249 | NA | non-coding | upstream | 5032 | 55405505 ~ 55405705 (-) |
| G275250 | NA | non-coding | upstream | 9670 | 55410143 ~ 55411487 (-) |
| G275252 | NA | non-coding | upstream | 12324 | 55412797 ~ 55413164 (-) |
| G275253 | NA | non-coding | upstream | 12746 | 55413219 ~ 55413719 (-) |
| LOC110520227 | plekhm3 | other | downstream | 280591 | 55068639 ~ 55122013 (-) |
| G274344 | LOC106586294 | other | downstream | 716998 | 54679918 ~ 54682805 (-) |
| G272713 | LOC106586324 | other | downstream | 2148719 | 53249926 ~ 53251084 (-) |
| LOC110520182 | NA | other | downstream | 2690987 | 52693956 ~ 52708816 (-) |
| il1rl1 | il1rl1 | other | downstream | 3799573 | 51596933 ~ 51619476 (-) |
| si:dkey-91i10.3 | LOC106586420 | other | upstream | 1870309 | 57270782 ~ 57297762 (-) |
| G277673 | LOC106586423 | other | upstream | 2002511 | 57402984 ~ 57403575 (-) |
| G277749 | LOC106586429 | other | upstream | 2183913 | 57584386 ~ 57589183 (-) |
| G284018 | NA | other | upstream | 7314102 | 62714575 ~ 62715177 (-) |
