Gene
RNA
| Item | Value |
|---|---|
| gene id | G275250 |
| gene name | NA |
| gene type | misc |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 55410143 ~ 55411487 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU312498 | False | 1285 | TUCP | 0.43 | 2 | 55410143 | 55411487 |
| TU312499 | False | 1254 | lncRNA | 0.43 | 3 | 55410143 | 55411487 |
| TU312500 | True | 1285 | TUCP | 0.43 | 2 | 55410143 | 55411487 |
55,407,200
55,407,600
55,408,000
55,408,400
55,408,800
55,409,200
55,409,600
55,410,000
55,410,400
55,410,800
55,411,200
55,411,600
55,412,000
55,412,400
55,412,800
55,413,200
55,413,600
55,414,000
NC_048567.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110520233 | NA | coding | downstream | 15140 | 55392189 ~ 55395003 (-) |
| crygs2 | LOC106586348 | coding | downstream | 18811 | 55389101 ~ 55391332 (-) |
| LOC110520232 | LOC106586350 | coding | downstream | 27982 | 55375915 ~ 55382161 (-) |
| armc8 | armc8 | coding | downstream | 38476 | 55357367 ~ 55371667 (-) |
| idh1 | LOC106586335 | coding | downstream | 263755 | 55131394 ~ 55146388 (-) |
| LOC110504309 | plcl1 | coding | upstream | 180877 | 55592364 ~ 55715785 (-) |
| LOC110520238 | LOC106586370 | coding | upstream | 368016 | 55779503 ~ 55821242 (-) |
| LOC110520241 | LOC106586374 | coding | upstream | 478895 | 55890382 ~ 55923883 (-) |
| LOC110520251 | LOC106586357 | coding | upstream | 572386 | 55983873 ~ 55985477 (-) |
| LOC110520250 | LOC106586358 | coding | upstream | 575616 | 55987103 ~ 55988048 (-) |
| G275249 | NA | non-coding | downstream | 4438 | 55405505 ~ 55405705 (-) |
| G275248 | NA | non-coding | downstream | 5429 | 55404476 ~ 55404714 (-) |
| G275244 | NA | non-coding | downstream | 9670 | 55399803 ~ 55400473 (-) |
| G275243 | NA | non-coding | downstream | 11897 | 55397890 ~ 55398246 (-) |
| G275252 | NA | non-coding | upstream | 1310 | 55412797 ~ 55413164 (-) |
| G275253 | NA | non-coding | upstream | 1732 | 55413219 ~ 55413719 (-) |
| G275255 | NA | non-coding | upstream | 3986 | 55415473 ~ 55444161 (-) |
| G275273 | NA | non-coding | upstream | 33621 | 55445108 ~ 55446072 (-) |
| G275274 | NA | non-coding | upstream | 35442 | 55446929 ~ 55447731 (-) |
| LOC110520227 | plekhm3 | other | downstream | 290931 | 55068639 ~ 55122013 (-) |
| G274344 | LOC106586294 | other | downstream | 727338 | 54679918 ~ 54682805 (-) |
| G272713 | LOC106586324 | other | downstream | 2159059 | 53249926 ~ 53251084 (-) |
| LOC110520182 | NA | other | downstream | 2701327 | 52693956 ~ 52708816 (-) |
| il1rl1 | il1rl1 | other | downstream | 3809913 | 51596933 ~ 51619476 (-) |
| si:dkey-91i10.3 | LOC106586420 | other | upstream | 1859295 | 57270782 ~ 57297762 (-) |
| G277673 | LOC106586423 | other | upstream | 1991497 | 57402984 ~ 57403575 (-) |
| G277749 | LOC106586429 | other | upstream | 2172899 | 57584386 ~ 57589183 (-) |
| G284018 | NA | other | upstream | 7303088 | 62714575 ~ 62715177 (-) |
| G286522 | NA | other | upstream | 9558062 | 64969549 ~ 64970755 (-) |
