G274895


Basic Information

Item Value
gene id G274895
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 55414101 ~ 55414384 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU312090
CACTGTGTTTGTCGTGttgctatataaaagccagtcaCCTCAAAGGGAAAAACCTCAACTATTCAACAGTGAATTGTGGGGCTGTAATTATGGGAAATGCGGGCAGGAAAAGTGGCTTTAGGTTTTTTACATTCAGCGACTAAGCACTTCTGATACTGAAGGAAGAGCTGCTGTTTATCGAAATGCTTTGGGCTAAACATAGTCAGCTGTCATTATGTACAGTATCTttgcagtgcttgacttggtcAGGAGCTCACCGGaactgagtaccggcacctcaaatg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU312090 True 284 lncRNA 0.44 1 55414101 55414384

Neighbor

gene id symbol gene type direction distance location
LOC110520234 LOC106586346 coding upstream 2546 55405871 ~ 55411555 (+)
lcmt2 NA coding upstream 25379 55380671 ~ 55388722 (+)
LOC110520231 dbr1 coding upstream 39243 55371759 ~ 55375526 (+)
kcnh3 LOC103481844 coding upstream 58451 55157443 ~ 55355650 (+)
LOC110520225 LOC106586338 coding upstream 369058 55021730 ~ 55045043 (+)
LOC110504295 LOC106586344 coding downstream 15809 55430193 ~ 55496588 (+)
rftn2 rftn2 coding downstream 327313 55741697 ~ 55779314 (+)
LOC110520236 LOC106586369 coding downstream 377975 55792359 ~ 55800630 (+)
LOC110520240 LOC106586372 coding downstream 419359 55833743 ~ 55849324 (+)
LOC118964367 NA coding downstream 427821 55842205 ~ 55842343 (+)
G274892 NA non-coding upstream 15898 55397890 ~ 55398203 (+)
G274885 NA non-coding upstream 26534 55387032 ~ 55387567 (+)
G274876 NA non-coding upstream 35107 55375913 ~ 55378994 (+)
G274828 NA non-coding upstream 56408 55356782 ~ 55357693 (+)
G274913 NA non-coding downstream 25358 55439742 ~ 55440949 (+)
G274914 NA non-coding downstream 29205 55443589 ~ 55444242 (+)
G274916 NA non-coding downstream 32523 55446907 ~ 55447994 (+)
G274917 NA non-coding downstream 38466 55452850 ~ 55454643 (+)
G274918 NA non-coding downstream 46162 55460546 ~ 55466157 (+)
G274592 NA other upstream 538986 54874399 ~ 54875115 (+)
G273094 LOC106586310 other upstream 1572484 53841264 ~ 53841617 (+)
G273004 LOC106586313 other upstream 1755418 53657461 ~ 53658683 (+)
G272965 NA other upstream 1761670 53648825 ~ 53652431 (+)
G275542 LOC106586374 other downstream 485810 55900194 ~ 55900743 (+)
G275553 LOC107595854 other downstream 500945 55915329 ~ 55916133 (+)
G277296 NA other downstream 1850183 57264567 ~ 57264892 (+)
G277973 NA other downstream 2375350 57789734 ~ 57790332 (+)
G280315 NA other downstream 4638332 60052716 ~ 60054417 (+)

Expression


Co-expression Network