G275273


Basic Information

Item Value
gene id G275273
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 55445108 ~ 55446072 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU312524
GTCTAAATGAATAATAAATTAAACACATTAGCCTTGGCGTGATTAAGAAGAAACTTTGCGTGGGCCCAAAAAAAGCAAGTGGCTGAATTCCCTGGTGTTTAATAAGATCGTGGCTGAATGGCTGAATTCCCTGGTGTTTAATAAGATCGTGGCTGAATGGCTGAATTCCCTGGTGTTTAATAAGATCGTGGCTGAATGGCTGAATTCCCTGGTGTTTAATAAGATCGTGGCTGAATGGCTGAATTCCCTGGTGTTTAATAAGATCGTGGCTGAATGGCTGAATTCCCTGGTGTTTAATAAGATTGTGACTGAATGGCTGAATTCCCTGGTGTTTAATAAGATCGTGGCTGAATGGCTGAATTCCCTGGTGTTTAATAAGATCGTGGCTGAATGGCTGAATTCCCTGGTGTTTAATAAGATCGTGGCTGAATGGCTGAATTCCCTGGTGTTTAATAAGATCGTGGCTGAATGGCTGAATTCCCTGGTGTTTAATAAGATCGTGGCTGAATGGCTGAATTCCCTGGTGTTTAATAAGATCGTGGCTGAATGGCTGAATTCCCTGGTGTTTAATAAGATCGTGGCTGAATGGCTGAATTCCCTGGTGTTTAATAAGATTGGCATGAAGAAATATGAAGGACCTTTGAATGGAAAGAAATGTGCTCCAGTGCTAGTACAgtagtttgtctctctctctctctctctctcttcctctctctctcttcctctctctctctctctctctctcttcctctctctctctttctctctctctctctcagaattcACATGCTAACAAACTGGCAGCTCTGTTCAAGAACAATAGAATAGCCATGTATAAATGGTATTGCTATAATACACCGTCTAATGTAAACAGCTTCAGGAACAGCTATTCAACTCTCTCCTCCAATATAAACTGCATGGAGGGAAATTGGCTCCCAACCTCCTGTAAACTAGATGATTATTTA

Function

NR:

description
PREDICTED: uncharacterized protein LOC106578542 isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU312524 True 965 lncRNA 0.42 1 55445108 55446072

Neighbor

gene id symbol gene type direction distance location
LOC110520233 NA coding downstream 50105 55392189 ~ 55395003 (-)
crygs2 LOC106586348 coding downstream 53776 55389101 ~ 55391332 (-)
LOC110520232 LOC106586350 coding downstream 62947 55375915 ~ 55382161 (-)
armc8 armc8 coding downstream 73441 55357367 ~ 55371667 (-)
idh1 LOC106586335 coding downstream 298720 55131394 ~ 55146388 (-)
LOC110504309 plcl1 coding upstream 146292 55592364 ~ 55715785 (-)
LOC110520238 LOC106586370 coding upstream 333431 55779503 ~ 55821242 (-)
LOC110520241 LOC106586374 coding upstream 444310 55890382 ~ 55923883 (-)
LOC110520251 LOC106586357 coding upstream 537801 55983873 ~ 55985477 (-)
LOC110520250 LOC106586358 coding upstream 541031 55987103 ~ 55988048 (-)
G275255 NA non-coding downstream 947 55415473 ~ 55444161 (-)
G275253 NA non-coding downstream 31389 55413219 ~ 55413719 (-)
G275252 NA non-coding downstream 31944 55412797 ~ 55413164 (-)
G275250 NA non-coding downstream 33621 55410143 ~ 55411487 (-)
G275249 NA non-coding downstream 39403 55405505 ~ 55405705 (-)
G275274 NA non-coding upstream 857 55446929 ~ 55447731 (-)
G275275 LOC106586344 non-coding upstream 3968 55450040 ~ 55450325 (-)
G275276 NA non-coding upstream 6059 55452131 ~ 55452533 (-)
G275280 NA non-coding upstream 10760 55456832 ~ 55457483 (-)
G275281 NA non-coding upstream 12115 55458187 ~ 55458400 (-)
LOC110520227 plekhm3 other downstream 325896 55068639 ~ 55122013 (-)
G274344 LOC106586294 other downstream 762303 54679918 ~ 54682805 (-)
G272713 LOC106586324 other downstream 2194024 53249926 ~ 53251084 (-)
LOC110520182 NA other downstream 2736292 52693956 ~ 52708816 (-)
si:dkey-91i10.3 LOC106586420 other upstream 1824710 57270782 ~ 57297762 (-)
G277673 LOC106586423 other upstream 1956912 57402984 ~ 57403575 (-)
G277749 LOC106586429 other upstream 2138314 57584386 ~ 57589183 (-)
G284018 NA other upstream 7268503 62714575 ~ 62715177 (-)
G286522 NA other upstream 9523477 64969549 ~ 64970755 (-)

Expression


Co-expression Network