Gene
RNA
| Item | Value |
|---|---|
| gene id | G274916 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 55446907 ~ 55447994 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU312112 | True | 844 | lncRNA | 0.46 | 2 | 55446907 | 55447994 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110520234 | LOC106586346 | coding | upstream | 35352 | 55405871 ~ 55411555 (+) |
| lcmt2 | NA | coding | upstream | 58185 | 55380671 ~ 55388722 (+) |
| LOC110520231 | dbr1 | coding | upstream | 72049 | 55371759 ~ 55375526 (+) |
| kcnh3 | LOC103481844 | coding | upstream | 91257 | 55157443 ~ 55355650 (+) |
| LOC110520225 | LOC106586338 | coding | upstream | 401864 | 55021730 ~ 55045043 (+) |
| rftn2 | rftn2 | coding | downstream | 293703 | 55741697 ~ 55779314 (+) |
| LOC110520236 | LOC106586369 | coding | downstream | 344365 | 55792359 ~ 55800630 (+) |
| LOC110520240 | LOC106586372 | coding | downstream | 385749 | 55833743 ~ 55849324 (+) |
| LOC118964367 | NA | coding | downstream | 394211 | 55842205 ~ 55842343 (+) |
| LOC118964369 | NA | coding | downstream | 395760 | 55843754 ~ 55843823 (+) |
| G274914 | NA | non-coding | upstream | 2665 | 55443589 ~ 55444242 (+) |
| G274913 | NA | non-coding | upstream | 5958 | 55439742 ~ 55440949 (+) |
| G274895 | NA | non-coding | upstream | 32523 | 55414101 ~ 55414384 (+) |
| G274892 | NA | non-coding | upstream | 48704 | 55397890 ~ 55398203 (+) |
| G274885 | NA | non-coding | upstream | 59340 | 55387032 ~ 55387567 (+) |
| G274917 | NA | non-coding | downstream | 4856 | 55452850 ~ 55454643 (+) |
| G274918 | NA | non-coding | downstream | 12552 | 55460546 ~ 55466157 (+) |
| G274919 | NA | non-coding | downstream | 18646 | 55466640 ~ 55466950 (+) |
| G274920 | NA | non-coding | downstream | 19965 | 55467959 ~ 55468544 (+) |
| G274921 | NA | non-coding | downstream | 21551 | 55469545 ~ 55469761 (+) |
| G274592 | NA | other | upstream | 571792 | 54874399 ~ 54875115 (+) |
| G273094 | LOC106586310 | other | upstream | 1605290 | 53841264 ~ 53841617 (+) |
| G273004 | LOC106586313 | other | upstream | 1788224 | 53657461 ~ 53658683 (+) |
| G272965 | NA | other | upstream | 1794476 | 53648825 ~ 53652431 (+) |
| G275542 | LOC106586374 | other | downstream | 452200 | 55900194 ~ 55900743 (+) |
| G275553 | LOC107595854 | other | downstream | 467335 | 55915329 ~ 55916133 (+) |
| G277296 | NA | other | downstream | 1816573 | 57264567 ~ 57264892 (+) |
| G277973 | NA | other | downstream | 2341740 | 57789734 ~ 57790332 (+) |
| G280315 | NA | other | downstream | 4604722 | 60052716 ~ 60054417 (+) |
