Gene
RNA
| Item | Value |
|---|---|
| gene id | G275275 |
| gene name | LOC106586344 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 55450040 ~ 55450325 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| LOW QUALITY PROTEIN: DNA-binding protein SATB2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU312526 | True | 286 | lncRNA | 0.64 | 1 | 55450040 | 55450325 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110520233 | NA | coding | downstream | 55037 | 55392189 ~ 55395003 (-) |
| crygs2 | LOC106586348 | coding | downstream | 58708 | 55389101 ~ 55391332 (-) |
| LOC110520232 | LOC106586350 | coding | downstream | 67879 | 55375915 ~ 55382161 (-) |
| armc8 | armc8 | coding | downstream | 78373 | 55357367 ~ 55371667 (-) |
| idh1 | LOC106586335 | coding | downstream | 303652 | 55131394 ~ 55146388 (-) |
| LOC110504309 | plcl1 | coding | upstream | 142039 | 55592364 ~ 55715785 (-) |
| LOC110520238 | LOC106586370 | coding | upstream | 329178 | 55779503 ~ 55821242 (-) |
| LOC110520241 | LOC106586374 | coding | upstream | 440057 | 55890382 ~ 55923883 (-) |
| LOC110520251 | LOC106586357 | coding | upstream | 533548 | 55983873 ~ 55985477 (-) |
| LOC110520250 | LOC106586358 | coding | upstream | 536778 | 55987103 ~ 55988048 (-) |
| G275274 | NA | non-coding | downstream | 2309 | 55446929 ~ 55447731 (-) |
| G275273 | NA | non-coding | downstream | 3968 | 55445108 ~ 55446072 (-) |
| G275255 | NA | non-coding | downstream | 5879 | 55415473 ~ 55444161 (-) |
| G275253 | NA | non-coding | downstream | 36321 | 55413219 ~ 55413719 (-) |
| G275252 | NA | non-coding | downstream | 36876 | 55412797 ~ 55413164 (-) |
| G275276 | NA | non-coding | upstream | 1806 | 55452131 ~ 55452533 (-) |
| G275280 | NA | non-coding | upstream | 6507 | 55456832 ~ 55457483 (-) |
| G275281 | NA | non-coding | upstream | 7862 | 55458187 ~ 55458400 (-) |
| G275282 | NA | non-coding | upstream | 8975 | 55459300 ~ 55459902 (-) |
| G275283 | NA | non-coding | upstream | 9643 | 55459968 ~ 55460225 (-) |
| G275250 | NA | other | downstream | 38553 | 55410143 ~ 55411487 (-) |
| LOC110520227 | plekhm3 | other | downstream | 330828 | 55068639 ~ 55122013 (-) |
| G274344 | LOC106586294 | other | downstream | 767235 | 54679918 ~ 54682805 (-) |
| G272713 | LOC106586324 | other | downstream | 2198956 | 53249926 ~ 53251084 (-) |
| LOC110520182 | NA | other | downstream | 2741224 | 52693956 ~ 52708816 (-) |
| si:dkey-91i10.3 | LOC106586420 | other | upstream | 1820457 | 57270782 ~ 57297762 (-) |
| G277673 | LOC106586423 | other | upstream | 1952659 | 57402984 ~ 57403575 (-) |
| G277749 | LOC106586429 | other | upstream | 2134061 | 57584386 ~ 57589183 (-) |
| G284018 | NA | other | upstream | 7264250 | 62714575 ~ 62715177 (-) |
| G286522 | NA | other | upstream | 9519224 | 64969549 ~ 64970755 (-) |
