G275282


Basic Information

Item Value
gene id G275282
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 55459300 ~ 55459902 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU312533
agtgatcatggacctcttggttgcatctctgatcagtcttctccttgtatgagctgaaagtttagagggacggccaggtcttgttagatttgcagtggtctgatactccttccatttcaatattatcgcttgcacagtgctccttgggatgtttaaagcttgggaaatctttttgtatccaaatccggctttaaacttcttcacaacagtatctcggacctgcctggtgtgttccttgttcttcatgatgctctctgcgcttttaacggacctctgagactatcacagtgcaggtgcatttatacggagacttgattacacacaggtggattgtatttatcatcattagtcatttaggtcaacattggatcattcagagatcctcactgaacttctggagagagtttgctgcactgaaagtaaaggggctgaataattttgcacgtccaattgttcagtttttgatttgttaaaaaacgtttgaaatatccaataaatgtcgttccacttcatgattgtgtcccacttgttgttgattcttcacaaaaaaatacagttttatatctttatgtttgaagcctgaaatgtggcaaaaggtcgcaa

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU312533 True 603 lncRNA 0.40 1 55459300 55459902

Neighbor

gene id symbol gene type direction distance location
LOC110520233 NA coding downstream 64297 55392189 ~ 55395003 (-)
crygs2 LOC106586348 coding downstream 67968 55389101 ~ 55391332 (-)
LOC110520232 LOC106586350 coding downstream 77139 55375915 ~ 55382161 (-)
armc8 armc8 coding downstream 87633 55357367 ~ 55371667 (-)
idh1 LOC106586335 coding downstream 312912 55131394 ~ 55146388 (-)
LOC110504309 plcl1 coding upstream 132462 55592364 ~ 55715785 (-)
LOC110520238 LOC106586370 coding upstream 319601 55779503 ~ 55821242 (-)
LOC110520241 LOC106586374 coding upstream 430480 55890382 ~ 55923883 (-)
LOC110520251 LOC106586357 coding upstream 523971 55983873 ~ 55985477 (-)
LOC110520250 LOC106586358 coding upstream 527201 55987103 ~ 55988048 (-)
G275281 NA non-coding downstream 900 55458187 ~ 55458400 (-)
G275280 NA non-coding downstream 1817 55456832 ~ 55457483 (-)
G275276 NA non-coding downstream 6767 55452131 ~ 55452533 (-)
G275275 LOC106586344 non-coding downstream 8975 55450040 ~ 55450325 (-)
G275274 NA non-coding downstream 11569 55446929 ~ 55447731 (-)
G275283 NA non-coding upstream 66 55459968 ~ 55460225 (-)
G275286 NA non-coding upstream 11797 55471699 ~ 55472158 (-)
G275287 NA non-coding upstream 13559 55473461 ~ 55473748 (-)
G275288 NA non-coding upstream 14138 55474040 ~ 55474349 (-)
G275289 NA non-coding upstream 14858 55474760 ~ 55475476 (-)
G275250 NA other downstream 47813 55410143 ~ 55411487 (-)
LOC110520227 plekhm3 other downstream 340088 55068639 ~ 55122013 (-)
G274344 LOC106586294 other downstream 776495 54679918 ~ 54682805 (-)
G272713 LOC106586324 other downstream 2208216 53249926 ~ 53251084 (-)
LOC110520182 NA other downstream 2750484 52693956 ~ 52708816 (-)
si:dkey-91i10.3 LOC106586420 other upstream 1810880 57270782 ~ 57297762 (-)
G277673 LOC106586423 other upstream 1943082 57402984 ~ 57403575 (-)
G277749 LOC106586429 other upstream 2124484 57584386 ~ 57589183 (-)
G284018 NA other upstream 7254673 62714575 ~ 62715177 (-)
G286522 NA other upstream 9509647 64969549 ~ 64970755 (-)

Expression


Co-expression Network